RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 SLC2A1P11166 492 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 IFNGR1P15260 489 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 KCNC1P48547 511 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF763Q0D2J5 394 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 FAM76BQ5HYJ3 339 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 FAM78AQ5JUQ0 283 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 OR13H1Q8NG92 308 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 RASSF5Q8WWW0 418 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 NELL2Q99435 816 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 TMEM109Q9BVC6 243 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 IGKV6D-41A0A0C4DH26 115 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 GLP1RP43220 463 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 GCGRP47871 477 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 PTH2RP49190 550 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 RPS16P62249 146 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF33AQ06730 810 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 IL17RDQ8NFM7 739 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 NEIL2Q969S2 332 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 CAMK1GQ96NX5 476 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 TSGA13Q96PP4 275 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 MKRN2Q9H000 416 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 ESRP2Q9H6T0 727 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 MBNL1Q9NR56 388 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 TAS2R7Q9NYW3 318 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 ADAMTS6Q9UKP5 1117 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 TMEM184BQ9Y519 407 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 DEPDC5O75140 1603 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 ANKRD28O15084 1053 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 ATXN7O15265 892 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 SULT1B1O43704 296 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 PFKMP08237 780 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 CD3GP09693 182 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF30P17039 623 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 CD6P30203 668 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 NKX6-1P78426 367 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 IRF4Q15306 451 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 PPP1R3BQ86XI6 285 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 NRMQ8IXM6 262 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 FRZBQ92765 325 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 CCDC59Q9P031 241 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 UBE2J1Q9Y385 318 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 CMAHPQ9Y471 501 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 P2RY10O00398 339 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 TP53I11O14683 189 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 TIMM8AO60220 97 aaPredicted RBP6.95□□□□□ -1.3
VPS13A-202ENST00000357409 PGCP20142 388 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 CD38P28907 300 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 OR2B11Q5JQS5 317 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 LINC00346Q8IVM7 164 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 ESX1Q8N693 406 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF740Q8NDX6 193 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 TMEM80Q96HE8 168 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 SULT2B1O00204 365 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 HS3ST1O14792 307 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 RAD51DO75771 328 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 KCNE1P15382 129 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 ITIH1P19827 911 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 POU3F3P20264 500 aaPredicted RBP6.95□□□□□ -1.3
VPS13A-202ENST00000357409 PBX1P40424 430 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 EFNA3P52797 238 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 CLDN12P56749 244 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 C6orf136Q5SQH8 315 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 SLC35D2Q76EJ3 337 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 SERINC5Q86VE9 423 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 IQCKQ8N0W5 287 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 SLC41A3Q96GZ6 507 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 TEPSINQ96N21 525 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 IER3IP1Q9Y5U9 82 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 IGKV3-7A0A075B6H7 116 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 HRGP04196 525 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 GLO1Q04760 184 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 PDCD1Q15116 288 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 ENPP6Q6UWR7 440 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 GPR155Q7Z3F1 870 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF641Q96N77 438 aaPredicted RBP6.95□□□□□ -1.3
VPS13A-202ENST00000357409 NEDD4LQ96PU5 975 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 FANCFQ9NPI8 374 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 CROCC2H7BZ55 1655 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 PRORSD1PA6NEY8 169 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 SERPINA7P05543 415 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 SRPRAP08240 638 aaKnown RBP6.95□□□□□ -1.3
VPS13A-202ENST00000357409 SLC5A2P31639 672 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 CLDN6P56747 220 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 MALLQ13021 153 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 PAFAH1B3Q15102 231 aaKnown RBP6.95□□□□□ -1.3
VPS13A-202ENST00000357409 C18orf63Q68DL7 685 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 DRICH1Q6PGQ1 229 aaPredicted RBP6.95□□□□□ -1.3
VPS13A-202ENST00000357409 SCD5Q86SK9 330 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 TSPEARQ8WU66 669 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 TMEM234Q8WY98 164 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 OR5P2Q8WZ92 322 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 GMPR2Q9P2T1 348 aaKnown RBP6.95□□□□□ -1.3
VPS13A-202ENST00000357409 PRSS51A0A1B0GVH4 220 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 PRSS38A1L453 326 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 KLK10O43240 276 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 SYT7O43581 403 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 CRTAPO75718 401 aaPredicted RBP6.95□□□□□ -1.3
VPS13A-202ENST00000357409 SEMG1P04279 462 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 RABIFP47224 123 aa6.95□□□□□ -1.3
VPS13A-202ENST00000357409 CLDN17P56750 224 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms