RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GAB3Q8WWW8 586 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 C7orf50Q9BRJ6 194 aaKnown RBP14.08□□□□□ -0.16
CHD4-201ENST00000357008 THAP7Q9BT49 309 aaPredicted RBP14.08□□□□□ -0.16
CHD4-201ENST00000357008 HAPLN2Q9GZV7 340 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 EMCNQ9ULC0 261 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 GPR45Q9Y5Y3 372 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 PIK3C2AO00443 1686 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 PEX12O00623 359 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 UBFD1O14562 309 aaKnown RBP14.08□□□□□ -0.16
CHD4-201ENST00000357008 ARL3P36405 182 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 MAGEA3P43357 314 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 MRPS10P82664 201 aaKnown RBP14.08□□□□□ -0.16
CHD4-201ENST00000357008 PIN1Q13526 163 aaPredicted RBP14.08□□□□□ -0.16
CHD4-201ENST00000357008 CSNK1A1LQ8N752 337 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 SLC22A8Q8TCC7 542 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 ZDHHC12Q96GR4 267 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 CNTNAP3BQ96NU0 1288 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 SGIP1Q9BQI5 828 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 MED1Q15648 1581 aaPredicted RBP14.08□□□□□ -0.16
CHD4-201ENST00000357008 RAB40BQ12829 278 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 AAK1Q2M2I8 961 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 IER5LQ5T953 404 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 TRIM46Q7Z4K8 759 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 METTL27Q8N6F8 245 aaPredicted RBP14.08□□□□□ -0.16
CHD4-201ENST00000357008 BMFQ96LC9 184 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 SYT11Q9BT88 431 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 LMO7Q8WWI1 1683 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 K7ERQ8 282 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 GPR32O75388 356 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 NDUFB2O95178 105 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 SLC16A8O95907 504 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 LUMP51884 338 aaPredicted RBP14.08□□□□□ -0.16
CHD4-201ENST00000357008 CCINQ13939 588 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 GRIN2CQ14957 1233 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 NDUFAF5Q5TEU4 345 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 ZNF529Q6P280 563 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 CDC6Q99741 560 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 SYT3Q9BQG1 590 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 GPR62Q9BZJ7 368 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 PELI2Q9HAT8 420 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 KCPQ6ZWJ8 1503 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 IL33O95760 270 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 UGT2B7P16662 529 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 RGS6P49758 472 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 ZNF691Q5VV52 312 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 FAM205BPQ63HN1 556 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 MAMDC2Q7Z304 686 aaPredicted RBP14.07□□□□□ -0.16
CHD4-201ENST00000357008 APMAPQ9HDC9 416 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 FZD3Q9NPG1 666 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 SPDEFO95238 335 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 TSPAN15O95858 294 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 HRGP04196 525 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 CFIP05156 583 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 RPS26P11Q5JNZ5 115 aaPredicted RBP14.07□□□□□ -0.16
CHD4-201ENST00000357008 KCTD20Q7Z5Y7 419 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 NT5DC2Q9H857 520 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 ASF1BQ9NVP2 202 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 CSF1P09603 554 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 WNT7BP56706 349 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 ARHGAP12Q8IWW6 846 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 OR7G3Q8NG95 312 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 MAN2C1Q9NTJ4 1040 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 IL20RAQ9UHF4 553 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 M0R3H8 397 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 ZNF35P13682 527 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 EVI2BP34910 448 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 RPL35P42766 123 aaKnown RBP14.07□□□□□ -0.16
CHD4-201ENST00000357008 GATMP50440 423 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 TBCEQ15813 527 aaPredicted RBP14.07□□□□□ -0.16
CHD4-201ENST00000357008 OR5D16Q8NGK9 328 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 TCTEX1D2Q8WW35 142 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 SORCS1Q8WY21 1168 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 SYNPO2LQ9H987 977 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 HEBP1Q9NRV9 189 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 SLCO3A1Q9UIG8 710 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 SPO11Q9Y5K1 396 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 ACOT7O00154 380 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 GM2AP17900 193 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 SDC1P18827 310 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 TAP2Q03519 686 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 CRTC1Q6UUV9 634 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 KDELC1Q6UW63 502 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 RHOXF1Q8NHV9 184 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 PPP4R1LQ9P1A2 415 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 ICKQ9UPZ9 632 aa14.07□□□□□ -0.16
CHD4-201ENST00000357008 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.07□□□□□ -0.16
CHD4-201ENST00000357008 DLG5Q8TDM6 1919 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 FAM221BA6H8Z2 402 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 PTPN6P29350 595 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 RAB28P51157 221 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 CTXN1P60606 82 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 PPA1Q15181 289 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 TMEM150AQ86TG1 271 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 SERINC5Q86VE9 423 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 SLC35F2Q8IXU6 374 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 NT5C3BQ969T7 300 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 PINK1Q9BXM7 581 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 GON7Q9BXV9 100 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 IL21RQ9HBE5 538 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 PCDHA9Q9Y5H5 950 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms