RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 GABARAPO95166 117 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 PFKLP17858 780 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 VSX2P58304 361 aaPredicted RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 WDR5P61964 334 aaKnown RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF440Q8IYI8 595 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 GLYATL1Q969I3 302 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR2M4Q96R27 311 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 SRA1Q9HD15 236 aaKnown RBP12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 EMC7Q9NPA0 242 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC7A11Q9UPY5 501 aa12.08□□□□□ -0.48
SYNCRIP-201ENST00000355238 KHNYNO15037 678 aaKnown RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 PEX14O75381 377 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 MT-ND4P03905 459 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 CBLP22681 906 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC18B1Q6NT16 456 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 TRIM46Q7Z4K8 759 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 NAGSQ8N159 534 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 HUS1BQ8NHY5 278 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 SH3RF2Q8TEC5 729 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 TMEM234Q8WY98 164 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 INPP5EQ9NRR6 644 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 RFXAPO00287 272 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 NPC1O15118 1278 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 STATHP02808 62 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 BMP1P13497 986 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 RAB6AP20340 208 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 C21orf33P30042 268 aaPredicted RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 GABRA3P34903 492 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF252P-AS1Q0IIN9 211 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 SF3B4Q15427 424 aaKnown RBP eCLIP12.07□□□□□ -0.482e-7■□□□□ 10.7
SYNCRIP-201ENST00000355238 PSAPL1Q6NUJ1 521 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 KDELC1Q6UW63 502 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 LYSMD2Q8IV50 215 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 NRMQ8IXM6 262 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR6V1Q8N148 313 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC41A3Q96GZ6 507 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 METTL17Q9H7H0 456 aaPredicted RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 ABI3Q9P2A4 366 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 B4GALT6Q9UBX8 382 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 AK6Q9Y3D8 172 aaKnown RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 PIRO00625 290 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 MSR1P21757 451 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 RPS26P62854 115 aaKnown RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF454Q8N9F8 522 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF384Q8TF68 577 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 HOXB13Q92826 284 aaPredicted RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 FOXRED1Q96CU9 486 aaPredicted RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF587Q96SQ5 575 aaPredicted RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 RASD1Q9Y272 281 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 H7BY64 318 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 LDB2O43679 373 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 GNSP15586 552 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 PAPD4Q6PIY7 484 aaKnown RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR7G3Q8NG95 312 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 SYNPRQ8TBG9 265 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 GLYATL2Q8WU03 294 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZBTB8AQ96BR9 441 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 PRAP1Q96NZ9 151 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 PSD2Q9BQI7 771 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 A8MUA0 341 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 P2RX6O15547 441 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 HCRTO43612 131 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 GPR37L1O60883 481 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 TNFRSF1BP20333 461 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 AMZ1Q400G9 498 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 TMEM35AQ53FP2 167 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC35F2Q8IXU6 374 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 BOLLQ8N9W6 283 aaKnown RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR4K17Q8NGC6 315 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR56B2PQ8NGI1 322 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 TRIB2Q92519 343 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 ELOVL2Q9NXB9 296 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 PLAGL1Q9UM63 463 aa12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 LSM5Q9Y4Y9 91 aaKnown RBP12.07□□□□□ -0.48
SYNCRIP-201ENST00000355238 RPS10-NUDT3A0A1W2PQS6 291 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 A0A1W2PS29 197 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 GAPDHSO14556 408 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF26P17031 533 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 RPS10P46783 165 aaKnown RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 ARSDP51689 593 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 IRF4Q15306 451 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 ACSM3Q53FZ2 586 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 MANEALQ5VSG8 457 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 LETMD1Q6P1Q0 360 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 CPOQ8IVL8 374 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 SGPP2Q8IWX5 399 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 LRRC25Q8N386 305 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZSCAN4Q8NAM6 433 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 LURAP1Q96LR2 239 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 QRSL1Q9H0R6 528 aaKnown RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 RNF208Q9H0X6 261 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 CIB4A0PJX0 185 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 FABP7O15540 132 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 ARSBP15848 533 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 NFYAP23511 347 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 MAT2AP31153 395 aaKnown RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 TAS2R38P59533 333 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 DBPQ10586 325 aaPredicted RBP12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 CCINQ13939 588 aa12.06□□□□□ -0.48
SYNCRIP-201ENST00000355238 ARHGAP12Q8IWW6 846 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms