RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 LSM11P83369 360 aaKnown RBP eCLIP20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 DOC2BQ14184 412 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 LTB4RQ15722 352 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 ZBTB8BQ8NAP8 495 aaPredicted RBP20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 CAMKVQ8NCB2 501 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 FLVCR1-AS1Q8TAF5 88 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 ACOT11Q8WXI4 607 aaPredicted RBP20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 BMFQ96LC9 184 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 CEP19Q96LK0 163 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 FCRL4Q96PJ5 515 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 OR2A14Q96R47 310 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 QPCTLQ9NXS2 382 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 PCDHGB6Q9Y5F9 930 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 HYKKA2RU49 373 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 CPSF4LA6NMK7 179 aaKnown RBP20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 ZNF670-ZNF695F2Z2N8 137 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 PTTG1O95997 202 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 EGFP01133 1207 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 RORCP51449 518 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 RGS8P57771 180 aaPredicted RBP20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 TMEM44Q2T9K0 475 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 C6orf132Q5T0Z8 1188 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 USP53Q70EK8 1073 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 PHC2Q8IXK0 858 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 OR2L13Q8N349 312 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 POC5Q8NA72 575 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 OR7G2Q8NG99 324 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 ZFPM2Q8WW38 1151 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 OSTF1Q92882 214 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 TSACCQ96A04 125 aaPredicted RBP20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 EGLN3Q9H6Z9 239 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 ANKRA2Q9H9E1 313 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 ISYNA1Q9NPH2 558 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 GPR55Q9Y2T6 319 aaPredicted RBP20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 CHST2Q9Y4C5 530 aa20.83■□□□□ 0.93
NKX2-1-201ENST00000354822 UBXN7O94888 489 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 OR5F1O95221 314 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 CPEP16870 476 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 HNRNPA2B1P22626 353 aaKnown RBP20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 CTHP32929 405 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 OMPP47874 163 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 PDX1P52945 283 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 COPZ1P61923 177 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 MYO9BQ13459 2157 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 LARS2Q15031 903 aaKnown RBP20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 ARHGAP11BQ3KRB8 267 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 ABHD13Q7L211 337 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 PEX5LQ8IYB4 626 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 SLC16A11Q8NCK7 471 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 GALNT6Q8NCL4 622 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 COL26A1Q96A83 441 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 PLA2G12AQ9BZM1 189 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 POLE4Q9NR33 117 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 DAPP1Q9UN19 280 aa20.83■□□□□ 0.92
NKX2-1-201ENST00000354822 A6NCN8 305 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 FCMRO60667 390 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 MAGP20916 626 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 FPR3P25089 353 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 RPS19P39019 145 aaKnown RBP20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 AVPR1BP47901 424 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 DEFA1P59665 94 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 DEFA3P59666 94 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 BNC1Q01954 994 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 MINDY4Q4G0A6 757 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 PRRT3Q5FWE3 981 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 RBM12BQ8IXT5 1001 aaKnown RBP20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 SLC30A2Q9BRI3 323 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 CCDC32Q9BV29 185 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 PRR14Q9BWN1 585 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 TMEM168Q9H0V1 697 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 MN1Q10571 1320 aaPredicted RBP20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 TMEM129A0AVI4 362 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 IMPDH2P12268 514 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 WNT4P56705 351 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 YPEL5P62699 121 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 HTR4Q13639 388 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 PUS10Q3MIT2 529 aaKnown RBP20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 FIGLAQ6QHK4 219 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 FAM111BQ6SJ93 734 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 FRRS1Q6ZNA5 592 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 PLEKHM3Q6ZWE6 761 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 CCL4L1Q8NHW4 92 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 MCHR1Q99705 422 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 NLGN3Q9NZ94 848 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 ZNF443Q9Y2A4 671 aaPredicted RBP20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 WDR45Q9Y484 360 aa20.82■□□□□ 0.92
NKX2-1-201ENST00000354822 FRS3O43559 492 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 RASGRP1O95267 797 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 UGT2B7P16662 529 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 ALOX12P18054 663 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 TRHRP34981 398 aaPredicted RBP20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 ETV5P41161 510 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 MTNR1AP48039 350 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 ETV1P50549 477 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 MRPS21P82921 87 aaKnown RBP20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 DEFB134Q4QY38 66 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 ANKK1Q8NFD2 765 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 SLC9A6Q92581 669 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 RFKQ969G6 155 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 RNFT2Q96EX2 444 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms