RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 SHANK3Q9BYB0 1731 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 SH3PXD2BA1X283 911 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 CDC14CA4D256 554 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 TMEM202A6NGA9 273 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 C2CD4DB7Z1M9 353 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 ARNTLO00327 626 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 ADAP00813 363 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 VEZF1Q14119 521 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 SERPINA11Q86U17 422 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 ARMC10Q8N2F6 343 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 OR9Q2Q8NGE9 314 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 TESCQ96BS2 214 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 PINK1Q9BXM7 581 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 TRBV11-1A0A0K0K1C0 115 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 FMO6PO60774 539 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 SLC2A2P11168 524 aaPredicted RBP14.05□□□□□ -0.16
COL17A1-201ENST00000353479 LSMEM2Q8N112 164 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 DPH1Q9BZG8 443 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 IL37Q9NZH6 218 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 T-ENOLP0DO92 83 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 SRFP11831 508 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 PGAM2P15259 253 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 CASP6P55212 293 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 LIPKQ5VXJ0 399 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 FBXO42Q6P3S6 717 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 LEG1Q6P5S2 330 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 IQCF1Q8N6M8 205 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 HORMAD2Q8N7B1 307 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 CLEC1AQ8NC01 280 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 WDR20Q8TBZ3 569 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 UBTD2Q8WUN7 234 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 CCNKO75909 580 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 ARNTP27540 789 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 CTXN1P60606 82 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 HOXC5Q00444 222 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 MAP4K2Q12851 820 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 EEF1A1P5Q5VTE0 462 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 ASRGL1Q7L266 308 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 PMM1Q92871 262 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 OR6C1Q96RD1 312 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 NMNAT1Q9HAN9 279 aaPredicted RBP14.04□□□□□ -0.16
COL17A1-201ENST00000353479 RXFP3Q9NSD7 469 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 CNIH4Q9P003 139 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 GPR52Q9Y2T5 361 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 LOXHD1Q8IVV2 1947 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 FNTBP49356 437 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 ACTC1P68032 377 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 ACTA1P68133 377 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 GALK2Q01415 458 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 GPR137CQ8N3F9 429 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 ZNF878C9JN71 531 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 C7P10643 843 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 UBL4AP11441 157 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 ZNF28P17035 718 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 CR2P20023 1033 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 GADD45AP24522 165 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 TACR1P25103 407 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 STARP49675 285 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 HBA1P69905 142 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 CBLBQ13191 982 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 SNX29P2Q8IUI4 249 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 FRS2Q8WU20 508 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 OR7D2Q96RA2 312 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 KLHL31Q9H511 634 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 SMOXQ9NWM0 555 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 URB1O60287 2271 aaKnown RBP14.04□□□□□ -0.16
COL17A1-201ENST00000353479 HTR3EA5X5Y0 456 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 METTL21EPA6NDL7 271 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 GRXCR2A6NFK2 248 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 SLC22A31A6NKX4 558 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 PLBD1Q6P4A8 553 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 LRFN4Q6PJG9 635 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 FKBP10Q96AY3 582 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 MAP3K3Q99759 626 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 STSP08842 583 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 PSKH1P11801 424 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 PYCR1P32322 319 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 KIAA1024LP59773 190 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 ARG2P78540 354 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 ZP2Q05996 745 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 DMPKQ09013 629 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 NDUFA5Q16718 116 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 OR2T11Q8NH01 316 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 PCDHGB2Q9Y5G2 931 aa14.04□□□□□ -0.16
COL17A1-201ENST00000353479 CCRL2O00421 344 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 FCER2P06734 321 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 MICAQ29983 383 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 TMEM236Q5W0B7 351 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 ZNF367Q7RTV3 350 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 SAMD8Q96LT4 415 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 SFXN2Q96NB2 322 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 KLHL21Q9UJP4 597 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 A0A1W2PPK0 400 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 TAPBPO15533 448 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 PPP1R3DO95685 299 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 CDKN2CP42773 168 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 EFR3AQ14156 821 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 FCRLBQ6BAA4 426 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 ZER1Q7Z7L7 766 aa14.03□□□□□ -0.16
COL17A1-201ENST00000353479 SFXN5Q8TD22 340 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms