RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PGRMC2O15173 223 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 SURF4O15260 269 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 ADH1CP00326 375 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 IGHA1P01876 353 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 ACP5P13686 325 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 CSF2RAP15509 400 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 GNSP15586 552 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 TRIM23P36406 574 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 CLCNKAP51800 687 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 MLLT1Q03111 559 aaPredicted RBP23■■□□□ 1.27
CPNE1-202ENST00000352393 DSG2Q14126 1118 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 EFR3AQ14156 821 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 TIGD3Q6B0B8 471 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 ABI3BPQ7Z7G0 1075 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 GLCCI1Q86VQ1 547 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 PIGXQ8TBF5 258 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 TMEM43Q9BTV4 400 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 TMED9Q9BVK6 235 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 BTBD1Q9H0C5 482 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 C11orf49Q9H6J7 331 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 RMI1Q9H9A7 625 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 GIMAP4Q9NUV9 329 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 EXOGQ9Y2C4 368 aaKnown RBP23■■□□□ 1.27
CPNE1-202ENST00000352393 CHST2Q9Y4C5 530 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 ALG5Q9Y673 324 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 A0A1W2PR48 441 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 CPSF4LA6NMK7 179 aaKnown RBP22.99■■□□□ 1.27
CPNE1-202ENST00000352393 AKAP8O43823 692 aaKnown RBP22.99■■□□□ 1.27
CPNE1-202ENST00000352393 NCR1O76036 304 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 HLA-DPB1P04440 258 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 PCCBP05166 539 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 PRKCAP17252 672 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 PRDX1Q06830 199 aaKnown RBP22.99■■□□□ 1.27
CPNE1-202ENST00000352393 SLC9A5Q14940 896 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 VASNQ6EMK4 673 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 MRM1Q6IN84 353 aaKnown RBP22.99■■□□□ 1.27
CPNE1-202ENST00000352393 SLC30A6Q6NXT4 461 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 MZT2BQ6NZ67 158 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 TMEM107Q6UX40 140 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 VRK2Q86Y07 508 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 TTLQ8NG68 377 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 GRPEL2Q8TAA5 225 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 KLK6Q92876 244 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 SENP5Q96HI0 755 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-202ENST00000352393 OR7D2Q96RA2 312 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 RNF32Q9H0A6 362 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 POLHQ9Y253 713 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 NUMA1Q14980 2115 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 ALX3O95076 343 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 STATHP02808 62 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 PRKAR1AP10644 381 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 FPR3P25089 353 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 BCL6P41182 706 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 P2RY2P41231 377 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 GALK2Q01415 458 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 DMPKQ09013 629 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 ST3GAL3Q11203 375 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 CLPPQ16740 277 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-202ENST00000352393 PAMR1Q6UXH9 720 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 PEX5LQ8IYB4 626 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 KLHL36Q8N4N3 616 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 OR52N1Q8NH53 320 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 NEIL3Q8TAT5 605 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 ZFAND1Q8TCF1 268 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 CHFRQ96EP1 664 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 ZFYVE19Q96K21 471 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 TBC1D17Q9HA65 648 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 PCDH10Q9P2E7 1040 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 ATG4BQ9Y4P1 393 aa22.99■■□□□ 1.27
CPNE1-202ENST00000352393 DNMT3AQ9Y6K1 912 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-202ENST00000352393 LYRM1O43325 122 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 CHST10O43529 356 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 EFCAB14O75071 495 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 PSKH1P11801 424 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 ITGB8P26012 769 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 ERP29P30040 261 aaKnown RBP22.98■■□□□ 1.27
CPNE1-202ENST00000352393 TRHRP34981 398 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-202ENST00000352393 CLDN20P56880 219 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 CHRNEQ04844 493 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 IL18Q14116 193 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 ZNF791Q3KP31 576 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-202ENST00000352393 CCDC116Q8IYX3 515 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 YIPF7Q8N8F6 280 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 MRPL43Q8N983 215 aaKnown RBP22.98■■□□□ 1.27
CPNE1-202ENST00000352393 OR2A1Q8NGT9 310 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 OR8K5Q8NH50 307 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 OSTF1Q92882 214 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 KCNJ15Q99712 375 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 HDHD5Q9BXW7 423 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 MED17Q9NVC6 651 aa22.98■■□□□ 1.27
CPNE1-202ENST00000352393 A0A1W2PS29 197 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 KLF4O43474 513 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 AIFM1O95831 613 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 CH25HO95992 272 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 HIST1H1TP22492 207 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-202ENST00000352393 CFL1P23528 166 aaKnown RBP22.97■■□□□ 1.27
CPNE1-202ENST00000352393 STAT5AP42229 794 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 EOGTQ5NDL2 527 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 GRASPQ7Z6J2 395 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-202ENST00000352393 DNAJA4Q8WW22 397 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms