RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ACVR1Q04771 509 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 ZNF627Q7L945 461 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 ZNF101Q8IZC7 436 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 MMP21Q8N119 569 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 OR7D2Q96RA2 312 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 MND1Q9BWT6 205 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 MS4A8Q9BY19 250 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 KIR3DX1Q9H7L2 352 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 TRPV5Q9NQA5 729 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 WDR37Q9Y2I8 494 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 YY2O15391 372 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 FZD6O60353 706 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 VBP1P61758 197 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 SMU1Q2TAY7 513 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 LIPKQ5VXJ0 399 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 IL20RBQ6UXL0 311 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 WDR20Q8TBZ3 569 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 FKBP7Q9Y680 259 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 UBE2QL1A1L167 161 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 ACOX3O15254 700 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 SIGLEC6O43699 453 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 TECPR1Q7Z6L1 1165 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 L3MBTL4Q8NA19 623 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 WDR12Q9GZL7 423 aaKnown RBP12.9□□□□□ -0.34
SMC6-201ENST00000351948 KLHL31Q9H511 634 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 EPHX3Q9H6B9 360 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 NMNAT1Q9HAN9 279 aaPredicted RBP12.9□□□□□ -0.34
SMC6-201ENST00000351948 LTB4R2Q9NPC1 389 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 ARMC1Q9NVT9 282 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 FAM118AQ9NWS6 357 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 TRAPPC13A5PLN9 417 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 FABP12A6NFH5 140 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 SRPX2O60687 465 aaPredicted RBP12.9□□□□□ -0.35
SMC6-201ENST00000351948 CDRT1O95170 752 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 CYB5AP00167 134 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 PRKCAP17252 672 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 MAOAP21397 527 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 CNR2P34972 360 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 HSD11B2P80365 405 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 CNPY1Q3B7I2 92 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 PLBD1Q6P4A8 553 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 PLET1Q6UQ28 207 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 MFSD2AQ8NA29 543 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 MSANTD3Q96H12 275 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 SAMD8Q96LT4 415 aa12.9□□□□□ -0.35
SMC6-201ENST00000351948 J3KTA2 159 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 RBMXL2O75526 392 aaKnown RBP12.89□□□□□ -0.35
SMC6-201ENST00000351948 PYCR1P32322 319 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 UGT8Q16880 541 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 C3orf38Q5JPI3 329 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 C6orf141Q5SZD1 244 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 EEF1A1P5Q5VTE0 462 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 C9orf43Q8TAL5 461 aaPredicted RBP12.89□□□□□ -0.35
SMC6-201ENST00000351948 UTP4Q969X6 686 aaKnown RBP12.89□□□□□ -0.35
SMC6-201ENST00000351948 OMA1Q96E52 524 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 B3GAT2Q9NPZ5 323 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 NOX1Q9Y5S8 564 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 IGHV3-20A0A0C4DH32 117 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 BRINP1O60477 761 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 DCTP40126 519 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 CHRNEQ04844 493 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 RASGEF1BQ0VAM2 473 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 ZNF283Q8N7M2 679 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 A0A1W2PRQ8 180 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 FOXE1O00358 373 aaPredicted RBP12.89□□□□□ -0.35
SMC6-201ENST00000351948 ACVR1BP36896 505 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 C14orf28Q4W4Y0 310 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 TNFAIP8L3Q5GJ75 292 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 ALG1LQ6GMV1 187 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 SLC25A24Q6NUK1 477 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 CROCCP3Q8IVE0 287 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 PNPLA2Q96AD5 504 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 TESCQ96BS2 214 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 OR4K3Q96R72 315 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 LRRC42Q9Y546 428 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 AP1M2Q9Y6Q5 423 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 NSG1A0A0A6YYJ2 146 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 HTR1AP08908 422 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 PKLRP30613 574 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 CTXN1P60606 82 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 TSPAN5P62079 268 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 DPTQ07507 201 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 PRAMEF20Q5VT98 475 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 CPZQ66K79 652 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 BORCS5Q969J3 196 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 RSPRY1Q96DX4 576 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 NRSN2Q9GZP1 204 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 GPR83Q9NYM4 423 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 UPB1Q9UBR1 384 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 SH3BGRL2Q9UJC5 107 aa12.89□□□□□ -0.35
SMC6-201ENST00000351948 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.89□□□□□ -0.35
SMC6-201ENST00000351948 PPP1R3DO95685 299 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 PCGF2P35227 344 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 KIAA1024LP59773 190 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 REEP5Q00765 189 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 LRFN4Q6PJG9 635 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 ZNF619Q8N2I2 560 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 NR4A3Q92570 626 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 PMM1Q92871 262 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 DCBLD2Q96PD2 775 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms