RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 EIPR1Q53HC9 387 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 MEDAGQ5VYS4 303 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 AP1ARQ63HQ0 302 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 TYW3Q6IPR3 259 aaKnown RBP15.6■□□□□ 0.09
SAMM50-201ENST00000350028 ZNF438Q7Z4V0 828 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 GKN2Q86XP6 184 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 MCATQ8IVS2 390 aaKnown RBP15.6■□□□□ 0.09
SAMM50-201ENST00000350028 CDRT4Q8N9R6 151 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 TMEM52Q8NDY8 209 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 OR5T3Q8NGG3 340 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 STACQ99469 402 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 FAM60AQ9NP50 221 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 DUSP22Q9NRW4 184 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 MKLN1Q9UL63 735 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 SATB2Q9UPW6 733 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 GPR55Q9Y2T6 319 aaPredicted RBP15.6■□□□□ 0.09
SAMM50-201ENST00000350028 CHST2Q9Y4C5 530 aa15.6■□□□□ 0.09
SAMM50-201ENST00000350028 A0A087WUU8 490 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 SRPX2O60687 465 aaPredicted RBP15.59■□□□□ 0.09
SAMM50-201ENST00000350028 ENTPD6O75354 484 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 UBXN7O94888 489 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 AK1P00568 194 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 WNT1P04628 370 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 NME1P15531 152 aaKnown RBP15.59■□□□□ 0.09
SAMM50-201ENST00000350028 FASLGP48023 281 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 MAZP56270 477 aaKnown RBP15.59■□□□□ 0.09
SAMM50-201ENST00000350028 DUSP8Q13202 625 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 DGUOKQ16854 277 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 PRICKLE4Q2TBC4 344 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 PLAG1Q6DJT9 500 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 ZNF367Q7RTV3 350 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 CLIP4Q8N3C7 705 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 ARL14Q8N4G2 192 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 TOR1AIP2Q8NFQ8 470 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 PMM1Q92871 262 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 IL4I1Q96RQ9 567 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 POLDIP3Q9BY77 421 aaKnown RBP15.59■□□□□ 0.09
SAMM50-201ENST00000350028 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.59■□□□□ 0.09
SAMM50-201ENST00000350028 OCEL1Q9H607 264 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 ADAP2Q9NPF8 381 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 CTPS2Q9NRF8 586 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 SEMA4GQ9NTN9 838 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 MAT2BQ9NZL9 334 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.59■□□□□ 0.09
SAMM50-201ENST00000350028 CLCA2Q9UQC9 943 aa15.59■□□□□ 0.09
SAMM50-201ENST00000350028 CPSF4LA6NMK7 179 aaKnown RBP15.58■□□□□ 0.08
SAMM50-201ENST00000350028 SGK494L7N484 410 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 SOX30O94993 753 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 OR5F1O95221 314 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 ADORA3P0DMS8 318 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 LIPAP38571 399 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 GIPRP48546 466 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 SERPINB10P48595 397 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 SKP1P63208 163 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 CDK5Q00535 292 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 OCA2Q04671 838 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 FZD5Q13467 585 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 GINS1Q14691 196 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 DECR1Q16698 335 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 PRTGQ2VWP7 1150 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 SLC25A30Q5SVS4 291 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 NIPAL1Q6NVV3 410 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 PLEKHM3Q6ZWE6 761 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 RRM2BQ7LG56 351 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 SLC46A3Q7Z3Q1 461 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 ARHGEF39Q8N4T4 335 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 FAM26EQ8N5C1 309 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 SIMC1Q8NDZ2 872 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 CADM4Q8NFZ8 388 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 ANKRD9Q96BM1 317 aaPredicted RBP15.58■□□□□ 0.08
SAMM50-201ENST00000350028 LGALS12Q96DT0 336 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 MCHR1Q99705 422 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF350Q9GZX5 532 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 SAP130Q9H0E3 1048 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 STARD5Q9NSY2 213 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 DOLKQ9UPQ8 538 aa15.58■□□□□ 0.08
SAMM50-201ENST00000350028 RPL36Q9Y3U8 105 aaKnown RBP15.58■□□□□ 0.08
SAMM50-201ENST00000350028 TDRD6O60522 2096 aaKnown RBP15.58■□□□□ 0.08
SAMM50-201ENST00000350028 KRBA1A5PL33 1030 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 LILRA5A6NI73 299 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 AGAP5A6NIR3 686 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 SLC9B1P1A6NJY1 282 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 FAM170BA6NMN3 283 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 FRS3O43559 492 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 HCRTR1O43613 425 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 STX11O75558 287 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 DBIP07108 87 aaKnown RBP15.57■□□□□ 0.08
SAMM50-201ENST00000350028 SLC35E2P0CK97 266 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 AVPR1BP47901 424 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 BMXP51813 675 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 SMSP52788 366 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 VBP1P61758 197 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 LSM3P62310 102 aaKnown RBP15.57■□□□□ 0.08
SAMM50-201ENST00000350028 MGAT2Q10469 447 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 TSPAN31Q12999 210 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 UBXN2BQ14CS0 331 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 NCF4Q15080 339 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 SYT16Q17RD7 645 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 MFSD4BQ5TF39 518 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF730Q6ZMV8 503 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms