RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 BLOC1S1P78537 153 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 MINDY4Q4G0A6 757 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 C18orf63Q68DL7 685 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 HFE2Q6ZVN8 426 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 SLC29A4Q7RTT9 530 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 C1orf52Q8N6N3 182 aaKnown RBP10.04□□□□□ -0.8
CAPN3-203ENST00000349748 CELF5Q8N6W0 485 aaKnown RBP10.04□□□□□ -0.8
CAPN3-203ENST00000349748 OR4C15Q8NGM1 316 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 OR56B4Q8NH76 319 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 PAWRQ96IZ0 340 aaKnown RBP10.04□□□□□ -0.8
CAPN3-203ENST00000349748 TSSK3Q96PN8 268 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 AP5M1Q9H0R1 490 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 MTG2Q9H4K7 406 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 CYSLTR2Q9NS75 346 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 CCL27Q9Y4X3 112 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 PTCH2Q9Y6C5 1203 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 AP1M2Q9Y6Q5 423 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 C9orf170A2RU37 121 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 IGHA2P01877 340 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 HLA-DQB2P05538 268 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 PEPDP12955 493 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 WARSP23381 471 aaKnown RBP10.04□□□□□ -0.8
CAPN3-203ENST00000349748 RAD52P43351 418 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 NDUFV1P49821 464 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 CASP9P55211 416 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 WNT3AP56704 352 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 PSMA6P60900 246 aaKnown RBP10.04□□□□□ -0.8
CAPN3-203ENST00000349748 ATP13A5Q4VNC0 1218 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 SSX6Q7RTT6 188 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 TCEANCQ8N8B7 351 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 ZNF383Q8NA42 475 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 ZSCAN1Q8NBB4 408 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 OR52I1Q8NGK6 324 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 SLAMF9Q96A28 289 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 MISP3Q96FF7 219 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 FCRL5Q96RD9 977 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 GPR21Q99679 349 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 C11orf49Q9H6J7 331 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 FZD3Q9NPG1 666 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 CRTAC1Q9NQ79 661 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 DHRS7Q9Y394 339 aa10.04□□□□□ -0.8
CAPN3-203ENST00000349748 OR8U8P0C7N1 319 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 EBLN1P0CF75 366 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 CNR1P21554 472 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 MBTD1Q05BQ5 628 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 ADIGQ0VDE8 80 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 LY6KQ17RY6 165 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 TTLL9Q3SXZ7 439 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 SV2CQ496J9 727 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 SDHAF4Q5VUM1 108 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 MEDAGQ5VYS4 303 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 SERPINA11Q86U17 422 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 ZNF614Q8N883 585 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 OR5M3Q8NGP4 307 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 POP5Q969H6 163 aaKnown RBP10.03□□□□□ -0.8
CAPN3-203ENST00000349748 CPNE4Q96A23 557 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-203ENST00000349748 OR1F2PQ96R84 312 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 BBS4Q96RK4 519 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 PBX4Q9BYU1 374 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 WNT5BQ9H1J7 359 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 WDR26Q9H7D7 661 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 ACSS1Q9NUB1 689 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-203ENST00000349748 DZANK1Q9NVP4 752 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 DLGAP4Q9Y2H0 992 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 BRCA2P51587 3418 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 COLCA2A8K830 154 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 OR7A17O14581 309 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 MPZL2O60487 215 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 SOX30O94993 753 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 BCKDHAP12694 445 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 HOXB9P17482 250 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-203ENST00000349748 SRSF3P84103 164 aaKnown RBP10.03□□□□□ -0.8
CAPN3-203ENST00000349748 PURAQ00577 322 aaKnown RBP10.03□□□□□ -0.8
CAPN3-203ENST00000349748 RBM39Q14498 530 aaKnown RBP10.03□□□□□ -0.8
CAPN3-203ENST00000349748 TTLL4Q14679 1199 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 ATXN7L2Q5T6C5 722 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-203ENST00000349748 ZNF621Q6ZSS3 439 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 FAM122BQ7Z309 247 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 MISPQ8IVT2 679 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 ZBTB8OSQ8IWT0 167 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 CFAP206Q8IYR0 622 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 HS6ST2Q96MM7 605 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 SLC25A32Q9H2D1 315 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 NPDC1Q9NQX5 325 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-203ENST00000349748 PPT2Q9UMR5 302 aa10.03□□□□□ -0.8
CAPN3-203ENST00000349748 PRAMEF25A6NGN4 478 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 PHYHO14832 338 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 ARIH2O95376 493 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 HOXC4P09017 264 aaPredicted RBP10.02□□□□□ -0.8
CAPN3-203ENST00000349748 TACR1P25103 407 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 GEMP55040 296 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 SREBF2Q12772 1141 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 SNTB2Q13425 540 aaKnown RBP10.02□□□□□ -0.8
CAPN3-203ENST00000349748 SMAD4Q13485 552 aaKnown RBP10.02□□□□□ -0.8
CAPN3-203ENST00000349748 FAM110CQ1W6H9 321 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 NCMAPQ5T1S8 102 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 IQCF1Q8N6M8 205 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 OR11G2Q8NGC1 345 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 GNPDA2Q8TDQ7 276 aa10.02□□□□□ -0.8
CAPN3-203ENST00000349748 THAP4Q8WY91 577 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms