RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CD8BP10966 210 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 FUT1P19526 365 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 NTSP30990 170 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 SOX9P48436 509 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 DMPKQ09013 629 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 ZNF485Q8NCK3 441 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 BBS10Q8TAM1 723 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 UFD1Q92890 307 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 ZNF707Q96C28 371 aaPredicted RBP16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 MS4A6EQ96DS6 147 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 OR7D2Q96RA2 312 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 BCL2L10Q9HD36 194 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 FGF20Q9NP95 211 aaPredicted RBP16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 PRSS16Q9NQE7 514 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 SPHK1Q9NYA1 384 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 MOSPD1Q9UJG1 213 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 LIPT1Q9Y234 373 aa16.97■□□□□ 0.31
PTP4A3-202ENST00000349124 SCN3AQ9NY46 2000 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 ANKRD34BA5PLL1 514 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 HRO43593 1189 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 HIST1H1TP22492 207 aaPredicted RBP16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 CDH11P55287 796 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 ZNF155Q12901 538 aaPredicted RBP16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 MLC1Q15049 377 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 C6orf132Q5T0Z8 1188 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 ADAMTSL4Q6UY14 1074 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 RDH10Q8IZV5 341 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 ASCC1Q8N9N2 400 aaKnown RBP16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 LILRB4Q8NHJ6 448 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 CAMK1GQ96NX5 476 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 CLCA2Q9UQC9 943 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 INSL6Q9Y581 213 aa16.96■□□□□ 0.31
PTP4A3-202ENST00000349124 CLEC3AO75596 197 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 FGF19O95750 216 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 DRD2P14416 443 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 DRD3P35462 400 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 SLC1A3P43003 542 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 OMPP47874 163 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 VASPP50552 380 aaPredicted RBP16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 CDK10Q15131 360 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 NDUFA5Q16718 116 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 NDUFA9Q16795 377 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 HSDL2Q6YN16 418 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 VWA5B2Q8N398 1253 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 TMEM145Q8NBT3 493 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 RNF170Q96K19 258 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 NDEL1Q9GZM8 345 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 RNF121Q9H920 327 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 SLC6A20Q9NP91 592 aa16.96■□□□□ 0.3
PTP4A3-202ENST00000349124 TMEM129A0AVI4 362 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 FAM172BPA6NC97 362 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 STK25O00506 426 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 MID1O15344 667 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 CTBP2P56545 445 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 ABHD17CQ6PCB6 329 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 RRM2BQ7LG56 351 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 MARCH9Q86YJ5 346 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 GDPD1Q8N9F7 314 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 TMEM255BQ8WV15 326 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 SUSD6Q92537 303 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 DIO2Q92813 273 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 FRMD6Q96NE9 622 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 MRPS18AQ9NVS2 196 aaKnown RBP16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 ADAM29Q9UKF5 820 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 ATG2BQ96BY7 2078 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 A0A1B0GVC2 190 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 A6NIN4 97 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 TTC36A6NLP5 189 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 SOCS6O14544 535 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 ATP5A1P25705 553 aaKnown RBP16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 TGM3Q08188 693 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 FGL2Q14314 439 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 MINDY4Q4G0A6 757 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 SNAP47Q5SQN1 464 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 ZNF438Q7Z4V0 828 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 NRMQ8IXM6 262 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 Q8N402 240 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 NUP43Q8NFH3 380 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 GNPDA2Q8TDQ7 276 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 COL26A1Q96A83 441 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 GDF15Q99988 308 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 ZNF649Q9BS31 505 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 FAIM2Q9BWQ8 316 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 PCBD2Q9H0N5 130 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 PPP1R3EQ9H7J1 279 aa16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 ISG20L2Q9H9L3 353 aaKnown RBP16.95■□□□□ 0.3
PTP4A3-202ENST00000349124 A0A0G2JPF8 293 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 CENPVL1A0A0U1RR11 272 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 HNRNPCL2B2RXH8 293 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 HNRNPCL3B7ZW38 293 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 CACNB4O00305 520 aaPredicted RBP16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 CDC42EP2O14613 210 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 RPN2P04844 631 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 HNRNPCL4P0DMR1 293 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 PSKH1P11801 424 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 GABRA5P31644 462 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 PDX1P52945 283 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 STXBP1P61764 594 aaKnown RBP16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 UBE3AQ05086 875 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 TSPAN31Q12999 210 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms