RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 KCNK2O95069 426 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 GABARAPO95166 117 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 DRD2P14416 443 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 PCMT1P22061 227 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 GADD45AP24522 165 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 MXD1Q05195 221 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 AMZ1Q400G9 498 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 ZNF404Q494X3 552 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 SLC48A1Q6P1K1 146 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 OOSP2Q86WS3 158 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 LYSMD2Q8IV50 215 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 TSTD1Q8NFU3 115 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 LMX1AQ8TE12 382 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 ELP4Q96EB1 424 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 ART5Q96L15 291 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 OR2A14Q96R47 310 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 SPATA9Q9BWV2 254 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 LMAN1LQ9HAT1 526 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 CACYBPQ9HB71 228 aaKnown RBP13.03□□□□□ -0.32
TRIM4-201ENST00000349062 FAM60AQ9NP50 221 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 EVA1BQ9NVM1 165 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 NDOR1Q9UHB4 597 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 CLEC2DQ9UHP7 191 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 CARD8Q9Y2G2 431 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 HEBP2Q9Y5Z4 205 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 MAU2Q9Y6X3 613 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 A8MUA0 341 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 LRRTM2O43300 516 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 OR10H2O60403 315 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 ATP6V1E1P36543 226 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 PCDH1Q08174 1060 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 TAB1Q15750 504 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 SNAPC1Q16533 368 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 LRIT3Q3SXY7 679 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 NRROSQ86YC3 692 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 TMEM52Q8NDY8 209 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 TBC1D20Q96BZ9 403 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 ZNF354BQ96LW1 612 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 SLX1AQ9BQ83 275 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 NUAK2Q9H093 628 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 TOR4AQ9NXH8 423 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 MAT2BQ9NZL9 334 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 UGT2A1Q9Y4X1 527 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 FANCMQ8IYD8 2048 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 ALPPP05187 535 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 FHP07954 510 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 TLX1P31314 330 aaPredicted RBP13.03□□□□□ -0.32
TRIM4-201ENST00000349062 KCNJ5P48544 419 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 DEFB133Q30KQ1 61 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 TMEM35AQ53FP2 167 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 SLC35F1Q5T1Q4 408 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 NKAIN2Q5VXU1 208 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 PLEKHM3Q6ZWE6 761 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 ZFP41Q8N8Y5 198 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 MFSD9Q8NBP5 474 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 SMRP1Q8NCR6 262 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 OR4K14Q8NGD5 310 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 DYNC2LI1Q8TCX1 351 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 GRHL3Q8TE85 626 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 CLN6Q9NWW5 311 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 TRIM64BA6NI03 449 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 SLC9B1P1A6NJY1 282 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 NOTOA8MTQ0 251 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 GPR89AB7ZAQ6 455 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 UPK1BO75841 260 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 GPR89BP0CG08 455 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 ST6GAL1P15907 406 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 ALAS2P22557 587 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 SOX3P41225 446 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 GINS1Q14691 196 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 TSTQ16762 297 aaKnown RBP13.02□□□□□ -0.32
TRIM4-201ENST00000349062 ARMCX4Q5H9R4 360 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 SVOPQ8N4V2 548 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 SRFBP1Q8NEF9 429 aaKnown RBP13.02□□□□□ -0.32
TRIM4-201ENST00000349062 DEPDC7Q96QD5 511 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 GPA33Q99795 319 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 TTYH2Q9BSA4 534 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 CNPPD1Q9BV87 410 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 SYNDIG1Q9H7V2 258 aa13.02□□□□□ -0.32
TRIM4-201ENST00000349062 DNAJB5O75953 348 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 PCSK2P16519 638 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 ABATP80404 500 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 FUT5Q11128 374 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 SUZ12Q15022 739 aaKnown RBP13.02□□□□□ -0.33
TRIM4-201ENST00000349062 ZIC1Q15915 447 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 BCL2A1Q16548 175 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 ZC3H12BQ5HYM0 836 aaKnown RBP13.02□□□□□ -0.33
TRIM4-201ENST00000349062 FCRLBQ6BAA4 426 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 PRR23CQ6ZRP0 262 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 PAQR7Q86WK9 346 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 CSNK1A1LQ8N752 337 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 AMER2Q8N7J2 671 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 OR4C15Q8NGM1 316 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 ZNF675Q8TD23 568 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 SLC35A4Q96G79 324 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 PEX11GQ96HA9 241 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 CITED4Q96RK1 184 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 FBXL21Q9UKT6 434 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 IFT52Q9Y366 437 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 WDR45Q9Y484 360 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms