RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 RNF175Q8N4F7 328 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 IQCF1Q8N6M8 205 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 BMPERQ8N8U9 685 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ZFP41Q8N8Y5 198 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 MOSPD2Q8NHP6 518 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 RPLP0P6Q8NHW5 317 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 RAET1EQ8TD07 263 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ECHDC3Q96DC8 303 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ASIC4Q96FT7 647 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 DPH7Q9BTV6 452 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 TMED9Q9BVK6 235 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 TMPRSS13Q9BYE2 586 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 NMRK2Q9NPI5 230 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 GKN1Q9NS71 199 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 GULP1Q9UBP9 304 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 TMEM5Q9Y2B1 443 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 MRPS7Q9Y2R9 242 aaKnown RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ANAPC1Q9H1A4 1944 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ANKDD1BA6NHY2 528 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 H0YC42 278 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 L7N2F9 121 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 LGALS8O00214 317 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 SIGLEC6O43699 453 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 PRAF2O60831 178 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ZNF254O75437 659 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 APOL3O95236 402 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 FCER2P06734 321 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 H1F0P07305 194 aaKnown RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ANXA4P09525 319 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ATP1B2P14415 290 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 CXCL2P19875 107 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 TIA1P31483 386 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 THBS2P35442 1172 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 OPRD1P41143 372 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 SLC1A3P43003 542 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 MTNR1AP48039 350 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 SLC11A1P49279 550 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 SRP9P49458 86 aaKnown RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 SMIM11AP58511 58 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ZNF385BQ569K4 471 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 MPP7Q5T2T1 576 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 THOC6Q86W42 341 aaKnown RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 NAXDQ8IW45 347 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 TOMM5Q8N4H5 51 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 CELF5Q8N6W0 485 aaKnown RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ASZ1Q8WWH4 475 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ABHD1Q96SE0 405 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 WRAP53Q9BUR4 548 aaKnown RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 SPRTNQ9H040 489 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 ZCCHC4Q9H5U6 513 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 REEP4Q9H6H4 257 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 TBC1D17Q9HA65 648 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 COA4Q9NYJ1 87 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 PRKAG2Q9UGJ0 569 aa9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 AFF4Q9UHB7 1163 aaKnown RBP9.72□□□□□ -0.85
CHRNA1-202ENST00000348749 TOXO94900 526 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 SLCO2B1O94956 709 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 ADRB1P08588 477 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 OR12D1P0DN82 309 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 CD79BP40259 229 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 GIPRP48546 466 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 CASP9P55211 416 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 RPS7P62081 194 aaKnown RBP9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 SNRPD1P62314 119 aaKnown RBP9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 ZNF155Q12901 538 aaPredicted RBP9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 PDE7AQ13946 482 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 DOC2AQ14183 400 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 GINS1Q14691 196 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 ATP13A5Q4VNC0 1218 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 EOGTQ5NDL2 527 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 VASNQ6EMK4 673 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 ATRAIDQ6UW56 229 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 Q6ZNB5 142 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 NR2C2APQ86WQ0 139 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 SIAH3Q8IW03 269 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 SLITRK4Q8IW52 837 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 LRRC56Q8IYG6 542 aaPredicted RBP9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 OR2AP1Q8NGE2 309 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 OR8K3Q8NH51 312 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 OR52N1Q8NH53 320 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 TIFAQ96CG3 184 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 ELMOD3Q96FG2 381 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 CASD1Q96PB1 797 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 DDOQ99489 341 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 CPEB1Q9BZB8 566 aaKnown RBP9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC19A3Q9BZV2 496 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 TM6SF2Q9BZW4 377 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 SAP130Q9H0E3 1048 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 FN3KQ9H479 309 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 NPDC1Q9NQX5 325 aaPredicted RBP9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 MARK1Q9P0L2 795 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 PURGQ9UJV8 347 aaKnown RBP9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 ACAD8Q9UKU7 415 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 SPATA2Q9UM82 520 aa9.71□□□□□ -0.86
CHRNA1-202ENST00000348749 C2orf92A0A1B0GVN3 265 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 PQLC2LA1A4F0 135 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 NPIPB15A6NHN6 443 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 CD8B2A6NJW9 211 aa9.7□□□□□ -0.86
CHRNA1-202ENST00000348749 KDM4EB2RXH2 506 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms