RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ACTC1P68032 377 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ACTA1P68133 377 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ZNF124Q15973 351 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 SLC22A25Q6T423 547 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 PRSS48Q7RTY5 328 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 LRRTM3Q86VH5 581 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ARL14Q8N4G2 192 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 MUL1Q969V5 352 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 NEDD4LQ96PU5 975 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 SLC22A11Q9NSA0 550 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 LTBP3Q9NS15 1303 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 C20orf202A1L168 122 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 LCHNA4D1U4 455 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 D6RAR5 112 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 J3QR89 54 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 RAF1P04049 648 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 SRPRAP08240 638 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 TPT1P13693 172 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 GCGRP47871 477 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ARRB1P49407 418 aaPredicted RBP10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 TLE4Q04727 773 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ATPAF1Q5TC12 328 aaPredicted RBP10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.55□□□□□ -0.722e-7■■□□□ 13.5
SMARCE1-202ENST00000348513 SERINC5Q86VE9 423 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 CMIPQ8IY22 773 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 OR9A1PQ8NGU1 263 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ZNF596Q8TC21 504 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 PHOSPHO1Q8TCT1 267 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 GSX2Q9BZM3 304 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 MARK1Q9P0L2 795 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ZFR2Q9UPR6 939 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 FAM208AQ9UK61 1670 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 C6P13671 934 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 CAPN3P20807 821 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 CAMLGP49069 296 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 LAPTM4AQ15012 233 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 SCGB2B2Q4G0G5 96 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 TMEM41BQ5BJD5 291 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ZBTB37Q5TC79 503 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 PRPF38BQ5VTL8 546 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 C5orf46Q6UWT4 87 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 OR2L3Q8NG85 312 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 OR4K17Q8NGC6 315 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 DOK4Q8TEW6 326 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 C7orf43Q8WVR3 580 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 OVCA2Q8WZ82 227 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 GPR22Q99680 433 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 MFFQ9GZY8 342 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 SERINC1Q9NRX5 453 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 AKAP12Q02952 1782 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ANKUB1A6NFN9 424 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 SLC2A1P11166 492 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ANXA8P13928 327 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 GRIK2Q13002 908 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 FCRLBQ6BAA4 426 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 MEGF10Q96KG7 1140 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 OR4K3Q96R72 315 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 TRIM2Q9C040 744 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 B3GNT4Q9C0J1 378 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 DERL2Q9GZP9 239 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 NKX2-4Q9H2Z4 354 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 METTL7AQ9H8H3 244 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 SMURF2Q9HAU4 748 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 TAS2R10Q9NYW0 307 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 LIPT1Q9Y234 373 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 MEIS3P2A8K0S8 358 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 AGAP14A8MT82 685 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 TLR4O00206 839 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 RAB36O95755 333 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 KLK3P07288 261 aaPredicted RBP10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 PER3P56645 1201 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ZNF627Q7L945 461 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 HMGN2P46Q86SG4 172 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 PLD6Q8N2A8 252 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 OR52E4Q8NGH9 312 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 HERPUD2Q9BSE4 406 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 ADAM7Q9H2U9 754 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 LDAHQ9H6V9 325 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 MIOXQ9UGB7 285 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 INTS6Q9UL03 887 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 PCDHGA5Q9Y5G8 931 aa10.55□□□□□ -0.72
SMARCE1-202ENST00000348513 MYH2Q9UKX2 1941 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 TSPAN6O43657 245 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 TOX4O94842 621 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 DLSTP36957 453 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 VAMP3Q15836 100 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 TMEM44Q2T9K0 475 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 RTP2Q5QGT7 225 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 SLC35F1Q5T1Q4 408 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 ERN2Q76MJ5 926 aaKnown RBP10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 DNAAF1Q8NEP3 725 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 OR4K1Q8NGD4 311 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 MAPK15Q8TD08 544 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 INTS12Q96CB8 462 aaKnown RBP10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 ELP4Q96EB1 424 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 MOCOSQ96EN8 888 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 CACNG6Q9BXT2 260 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 CD244Q9BZW8 370 aa10.54□□□□□ -0.72
SMARCE1-202ENST00000348513 GPATCH2Q9NW75 528 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms