RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ANP32DO95626 131 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 ATP1B1P05026 303 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 COX7A2P14406 83 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 GALNSP34059 522 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 ELOAQ14241 798 aaKnown RBP14.79□□□□□ -0.04
RAB5C-201ENST00000346213 SAMD4BQ5PRF9 694 aaKnown RBP14.79□□□□□ -0.04
RAB5C-201ENST00000346213 PRAMEF20Q5VT98 475 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 C3P1Q6ZMU1 363 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 RNF111Q6ZNA4 994 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 GLB1L3Q8NCI6 653 aaPredicted RBP14.79□□□□□ -0.04
RAB5C-201ENST00000346213 NUDT8Q8WV74 236 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 RELTQ969Z4 430 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 S100A14Q9HCY8 104 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 AHSPQ9NZD4 102 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 SUCOQ9UBS9 1254 aaKnown RBP14.79□□□□□ -0.04
RAB5C-201ENST00000346213 ERVK-11Q9UQG0 969 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 TMED5Q9Y3A6 229 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 MAST4O15021 2626 aa14.79□□□□□ -0.04
RAB5C-201ENST00000346213 FXYD1O00168 92 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 NPPAP01160 153 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 FBXO45P0C2W1 286 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 RFPL3SP0C7P2 107 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 PRPS2P11908 318 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 PORP16435 677 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-201ENST00000346213 NT5EP21589 574 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 CA7P43166 264 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 ADORA2A-AS1P86434 159 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 ZNF628Q5EBL2 1059 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 FAM9CQ8IZT9 166 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 RPRMLQ8N4K4 120 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 HORMAD2Q8N7B1 307 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 TMEM125Q96AQ2 219 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 VPS33AQ96AX1 596 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 EXOSC8Q96B26 276 aaKnown RBP14.78□□□□□ -0.04
RAB5C-201ENST00000346213 LRRC58Q96CX6 371 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 CCDC120Q96HB5 630 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 ITPAQ9BY32 194 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 NXF5Q9H1B4 397 aaKnown RBP14.78□□□□□ -0.04
RAB5C-201ENST00000346213 OR10A5Q9H207 317 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 SIRT5Q9NXA8 310 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 TUBA8Q9NY65 449 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-201ENST00000346213 ABCD2Q9UBJ2 740 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 TNFRSF10DQ9UBN6 386 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 CNOT11Q9UKZ1 510 aaKnown RBP14.78□□□□□ -0.04
RAB5C-201ENST00000346213 KLF13Q9Y2Y9 288 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-201ENST00000346213 SPTBN1Q01082 2364 aaKnown RBP14.78□□□□□ -0.04
RAB5C-201ENST00000346213 EML6Q6ZMW3 1958 aa14.78□□□□□ -0.04
RAB5C-201ENST00000346213 TRGV8A0A0C4DH27 118 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 SYNDIG1LA6NDD5 238 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 B4DXG7 233 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 ACOT8O14734 319 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 BCAS2O75934 225 aaPredicted RBP14.77□□□□□ -0.04
RAB5C-201ENST00000346213 PDE9AO76083 593 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 GP1BBP13224 206 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 ANPEPP15144 967 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 FBXW4P57775 412 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 TRA2BP62995 288 aaKnown RBP14.77□□□□□ -0.04
RAB5C-201ENST00000346213 MS4A2Q01362 244 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 ACSM2AQ08AH3 577 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 TRAP1Q12931 704 aaKnown RBP14.77□□□□□ -0.04
RAB5C-201ENST00000346213 TRIM25Q14258 630 aaKnown RBP14.77□□□□□ -0.04
RAB5C-201ENST00000346213 SPATS1Q496A3 300 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 ZNF385BQ569K4 471 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 ACSM2BQ68CK6 577 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 FAM71E1Q6IPT2 247 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 Q6ZPB1 254 aaPredicted RBP14.77□□□□□ -0.04
RAB5C-201ENST00000346213 RTL4Q6ZR62 310 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 LIX1Q8N485 282 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 DPP10Q8N608 796 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 OR5M3Q8NGP4 307 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 OR9A2Q8NGT5 310 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 SLC26A7Q8TE54 656 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 KAT2AQ92830 837 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 NTNG2Q96CW9 530 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 ASB9Q96DX5 294 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 SPACA9Q96E40 222 aaPredicted RBP14.77□□□□□ -0.04
RAB5C-201ENST00000346213 METTL2AQ96IZ6 378 aaKnown RBP14.77□□□□□ -0.04
RAB5C-201ENST00000346213 FCRL1Q96LA6 429 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 ZBTB18Q99592 522 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 TTTY12Q9BZ98 90 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 PLSCR2Q9NRY7 297 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 UTS2RQ9UKP6 389 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 ADGRG4Q8IZF6 3080 aa14.77□□□□□ -0.04
RAB5C-201ENST00000346213 PRORSD1PA6NEY8 169 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 C17orf51A8MQB3 221 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 ANXA4P09525 319 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-201ENST00000346213 BCKDHAP12694 445 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 ENDOUP21128 410 aaKnown RBP14.77□□□□□ -0.05
RAB5C-201ENST00000346213 MAPK1P28482 360 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 PTDSS1P48651 473 aaKnown RBP14.77□□□□□ -0.05
RAB5C-201ENST00000346213 EMDP50402 254 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 SLC7A2P52569 658 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 MAP4K2Q12851 820 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 NFYCQ13952 458 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 FLOT2Q14254 428 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 CEBPEQ15744 281 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 SPIN4Q56A73 249 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 EMC4Q5J8M3 183 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 PAGE3Q5JUK9 113 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 WLSQ5T9L3 541 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms