RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 PTGFRNQ9P2B2 879 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 ZNF624Q9P2J8 865 aaPredicted RBP16.72■□□□□ 0.27
VHL-202ENST00000345392 ADAM30Q9UKF2 790 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 ITM2BQ9Y287 266 aa16.72■□□□□ 0.27
VHL-202ENST00000345392 A0A0C4DFX4 3053 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 A0A0G2JN53 185 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 UBXN7O94888 489 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 EIF4EP06730 217 aaKnown RBP16.71■□□□□ 0.27
VHL-202ENST00000345392 ACP5P13686 325 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 BTCP35070 178 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 EOGTQ5NDL2 527 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 KIAA1211LQ6NV74 962 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 OR9A1PQ8NGU1 263 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 KLK6Q92876 244 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 RFT1Q96AA3 541 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 HEXA-AS1Q9H8Q6 139 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 TDP1Q9NUW8 608 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 HCFC1R1Q9NWW0 138 aa16.71■□□□□ 0.27
VHL-202ENST00000345392 SLC19A2O60779 497 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 RAF1P04049 648 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 BTG1P62324 171 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 NTRK2Q16620 822 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 ARSIQ5FYB1 569 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 GPR135Q8IZ08 494 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 HSD17B8Q92506 261 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 TIFAQ96CG3 184 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 SLC38A2Q96QD8 506 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 HMX1Q9NP08 348 aaPredicted RBP16.71■□□□□ 0.26
VHL-202ENST00000345392 P2RX2Q9UBL9 471 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 SLC25A13Q9UJS0 675 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 SLC9A8Q9Y2E8 581 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 MYO10Q9HD67 2058 aa16.71■□□□□ 0.26
VHL-202ENST00000345392 OBSL1O75147 1896 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 IRGMA1A4Y4 181 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 FAM170BA6NMN3 283 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 SLC2A10O95528 541 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 XPAP23025 273 aaPredicted RBP16.7■□□□□ 0.26
VHL-202ENST00000345392 STOMP27105 288 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 RPA4Q13156 261 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 RAB33AQ14088 237 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 FAM27D1Q5T7N8 215 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 LRRC56Q8IYG6 542 aaPredicted RBP16.7■□□□□ 0.26
VHL-202ENST00000345392 KLHL36Q8N4N3 616 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 SAMD12Q8N8I0 201 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 MS4A3Q96HJ5 214 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 ZNF649Q9BS31 505 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 SLC46A2Q9BY10 475 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 GHITMQ9H3K2 345 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 NT5DC2Q9H857 520 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 NEUROD4Q9HD90 331 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 TEX10Q9NXF1 929 aaPredicted RBP16.7■□□□□ 0.26
VHL-202ENST00000345392 A8MUA0 341 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 KDM4EB2RXH2 506 aaPredicted RBP16.7■□□□□ 0.26
VHL-202ENST00000345392 DHFRP00374 187 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 ALPPL2P10696 532 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 GNSP15586 552 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 TRIM23P36406 574 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 TJAP1Q5JTD0 557 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 HTR3DQ70Z44 454 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 TRAPPC5Q8IUR0 188 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 BEST4Q8NFU0 473 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 LMLNQ96KR4 655 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 NUP50Q9UKX7 468 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 CLEC4AQ9UMR7 237 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 CSNK1G3Q9Y6M4 447 aa16.7■□□□□ 0.26
VHL-202ENST00000345392 TEX51A0A1B0GUA7 166 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 FEZF1A0PJY2 475 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 PCBP4P57723 403 aaKnown RBP16.69■□□□□ 0.26
VHL-202ENST00000345392 SRP54P61011 504 aaKnown RBP16.69■□□□□ 0.26
VHL-202ENST00000345392 DSG2Q14126 1118 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 POGLUT1Q8NBL1 392 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 CHFRQ96EP1 664 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 ABHD1Q96SE0 405 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 TBX5Q99593 518 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 RANBP3Q9H6Z4 567 aaPredicted RBP16.69■□□□□ 0.26
VHL-202ENST00000345392 DDX31Q9H8H2 851 aaKnown RBP16.69■□□□□ 0.26
VHL-202ENST00000345392 CACNG2Q9Y698 323 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 SIRT4Q9Y6E7 314 aaPredicted RBP16.69■□□□□ 0.26
VHL-202ENST00000345392 FAM183AA6NL82 134 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 TPOP07202 933 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 TIMP2P16035 220 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 GSTM3P21266 225 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 SHC1P29353 583 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 SOX9P48436 509 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 OR10A3P58181 314 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 DCDC1P59894 354 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 FZD5Q13467 585 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 MPP7Q5T2T1 576 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 TCEAL8Q8IYN2 117 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 AMER3Q8N944 861 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 OR5M3Q8NGP4 307 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 OR4Q3Q8NH05 313 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 PRRC1Q96M27 445 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 C17orf62Q9BQA9 187 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 FAM83CQ9BQN1 747 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 CYSLTR2Q9NS75 346 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 PHF11Q9UIL8 331 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 POLHQ9Y253 713 aa16.69■□□□□ 0.26
VHL-202ENST00000345392 CPSF4LA6NMK7 179 aaKnown RBP16.68■□□□□ 0.26
VHL-202ENST00000345392 RB1P06400 928 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms