RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SNTB1Q13884 538 aaKnown RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 SLC25A52Q3SY17 297 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 NAA40Q86UY6 237 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 ZBTB44Q8NCP5 570 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 FAM3CQ92520 227 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 NKD2Q969F2 451 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 FAM46BQ96A09 425 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 SLC35C1Q96A29 364 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 RGMAQ96B86 450 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 DOHHQ9BU89 302 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 UBTD1Q9HAC8 227 aa5.89□□□□□ -1.47
VCAN-203ENST00000343200 RBFOX1Q9NWB1 397 aaKnown RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 TRPM3Q9HCF6 1732 aaPredicted RBP5.89□□□□□ -1.47
VCAN-203ENST00000343200 KDM3BQ7LBC6 1761 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CNTNAP1P78357 1384 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 SLC22A31A6NKX4 558 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 A8MUA0 341 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 A8MX80 341 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ARPC1BO15143 372 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 TMEM63AO94886 807 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CBSLP0DN79 551 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ZNF43P17038 809 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CHRNB4P30926 498 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CBSP35520 551 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 WNT4P56705 351 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 HIST1H3AP68431 136 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 BDH1Q02338 343 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 GAS6Q14393 721 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 COL19A1Q14993 1142 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ERFEQ4G0M1 354 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 TMEM119Q4V9L6 283 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ZNF484Q5JVG2 852 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ZNF648Q5T619 568 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 ZNF783Q6ZMS7 281 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 KDF1Q8NAX2 398 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 ZFP90Q8TF47 636 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 FCRL2Q96LA5 508 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 SLC2A6Q9UGQ3 507 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 LOC102724200A0A096LPH7 203 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 TRBC2A0A5B9 178 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 EPHB6O15197 1021 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 KNG1P01042 644 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ICAM1P05362 532 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 OR5H8P0DN80 308 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 BMP2P12643 396 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 FGF7P21781 194 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CXCR1P25024 350 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 TNFRSF17Q02223 184 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 TUSC3Q13454 348 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CYP1B1Q16678 543 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 GDPD4Q6W3E5 623 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 KLHDC8BQ8IXV7 354 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 SLC38A6Q8IZM9 456 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 NLGN2Q8NFZ4 835 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 OR4K1Q8NGD4 311 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 OR2D3Q8NGH3 330 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 OR56B1Q8NGI3 324 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 FGGYQ96C11 551 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 TMEM169Q96HH4 297 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ELF4Q99607 663 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 MCOLN1Q9GZU1 580 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CWH43Q9H720 699 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 TESQ9UGI8 421 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 A0A1W2PQ09 198 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 GPR182O15218 404 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ZNF780AO75290 641 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 SLC5A2P31639 672 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 TSFMP43897 325 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 KCNC1P48547 511 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 ERVK-16P61578 105 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 RPL7AP62424 266 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 CTXN3Q4LDR2 81 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 TRNP1Q6NT89 227 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 LMX1AQ8TE12 382 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 TFGQ92734 400 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 VRTNQ9H8Y1 702 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 A6NDN8 102 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 C9JVG2 144 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 TLL1O43897 1013 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 FOLR1P15328 257 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 AK4P27144 223 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 PCP4P48539 62 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 HSPA7P48741 367 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 P2RX1P51575 399 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CLRN1P58418 232 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 CD81P60033 236 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 C1QTNF8P60827 252 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 DPYSL2Q16555 572 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 MOGAT2Q3SYC2 334 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 FLYWCH1Q4VC44 716 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 LDB1Q86U70 411 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 GCNT2Q8N0V5 402 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 B3GNT7Q8NFL0 401 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 KCTD12Q96CX2 325 aaKnown RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 KPTNQ9Y664 436 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 F6UZH7 168 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 AMHP03971 560 aa5.88□□□□□ -1.47
VCAN-203ENST00000343200 IGFBP1P08833 259 aaPredicted RBP5.88□□□□□ -1.47
VCAN-203ENST00000343200 BMP1P13497 986 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms