RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 NPSR1Q6W5P4 371 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 TRPM8Q7Z2W7 1104 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 RNF130Q86XS8 419 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 ZNF843Q8N446 348 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 SLC16A11Q8NCK7 471 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 PNPT1Q8TCS8 783 aaKnown RBP20.24■□□□□ 0.83
RBM38-201ENST00000342690 MIPOL1Q8TD10 442 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 HOXB13Q92826 284 aaPredicted RBP20.24■□□□□ 0.83
RBM38-201ENST00000342690 OR7D2Q96RA2 312 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 STACQ99469 402 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 CGREF1Q99674 301 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 DUSP22Q9NRW4 184 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 HPF1Q9NWY4 346 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 GIN1Q9NXP7 522 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 SLC25A37Q9NYZ2 338 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 VAPAQ9P0L0 249 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 ANAPC2Q9UJX6 822 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 CORO2BQ9UQ03 480 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 PCDHGB3Q9Y5G1 929 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 FAM208BQ5VWN6 2430 aa20.24■□□□□ 0.83
RBM38-201ENST00000342690 TRBV5-3A0A0A0MS03 114 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 TRAV17A0A0B4J275 112 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 EVPLLA8MZ36 301 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 TO15178 435 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 SORBS2O94875 1100 aaKnown RBP20.23■□□□□ 0.83
RBM38-201ENST00000342690 AGR2O95994 175 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 MAP3K8P41279 467 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 PLCXD2Q0VAA5 305 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 ART3Q13508 389 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 DUSP5Q16690 384 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 CYP27C1Q4G0S4 372 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 MSRB3Q8IXL7 192 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 GPALPP1Q8IXQ4 340 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 DND1Q8IYX4 353 aaKnown RBP20.23■□□□□ 0.83
RBM38-201ENST00000342690 SLC34A3Q8N130 599 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 CYP4Z2PQ8N1L4 340 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 COX18Q8N8Q8 333 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 OR52N2Q8NGI0 321 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 ROPN1LQ96C74 230 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 OTUB1Q96FW1 271 aaPredicted RBP20.23■□□□□ 0.83
RBM38-201ENST00000342690 HES7Q9BYE0 225 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 OR51I1Q9H343 314 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 PIGUQ9H490 435 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 ARL8BQ9NVJ2 186 aa20.23■□□□□ 0.83
RBM38-201ENST00000342690 MRTO4Q9UKD2 239 aaKnown RBP20.23■□□□□ 0.83
RBM38-201ENST00000342690 FBXO45P0C2W1 286 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 CRATP43155 626 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 NUDT2P50583 147 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 CASP9P55211 416 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 POU6F2P78424 691 aaPredicted RBP20.22■□□□□ 0.83
RBM38-201ENST00000342690 DECR1Q16698 335 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 ZNF766Q5HY98 468 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 EXOSC6Q5RKV6 272 aaKnown RBP20.22■□□□□ 0.83
RBM38-201ENST00000342690 ATAD3BQ5T9A4 648 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 TNFAIP8L2Q6P589 184 aaPredicted RBP20.22■□□□□ 0.83
RBM38-201ENST00000342690 PRR22Q8IZ63 422 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 CDS1Q92903 461 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 LRRC58Q96CX6 371 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 CBLCQ9ULV8 474 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 PCDHGA10Q9Y5H3 936 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 NPFFR2Q9Y5X5 522 aa20.22■□□□□ 0.83
RBM38-201ENST00000342690 CHD6Q8TD26 2715 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 ASNA1O43681 348 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 SLC25A12O75746 678 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 UNC5CO95185 931 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 ESRRAP11474 423 aaPredicted RBP20.21■□□□□ 0.83
RBM38-201ENST00000342690 ABCD3P28288 659 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 IL12BP29460 328 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 MAN2A2P49641 1150 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 MNAT1P51948 309 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 PSMD4P55036 377 aaKnown RBP20.21■□□□□ 0.83
RBM38-201ENST00000342690 FADDQ13158 208 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 CAPRIN1Q14444 709 aaKnown RBP20.21■□□□□ 0.83
RBM38-201ENST00000342690 ZNF791Q3KP31 576 aaPredicted RBP20.21■□□□□ 0.83
RBM38-201ENST00000342690 RUNDC3AQ59EK9 446 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.21■□□□□ 0.83
RBM38-201ENST00000342690 HORMAD2Q8N7B1 307 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 OR5D16Q8NGK9 328 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 PIK3R3Q92569 461 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 SPACA9Q96E40 222 aaPredicted RBP20.21■□□□□ 0.83
RBM38-201ENST00000342690 OMA1Q96E52 524 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 RMND5BQ96G75 393 aaPredicted RBP20.21■□□□□ 0.83
RBM38-201ENST00000342690 SCMH1Q96GD3 660 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 ANKRD27Q96NW4 1050 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 SH3GL1Q99961 368 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 CPPED1Q9BRF8 314 aaPredicted RBP20.21■□□□□ 0.83
RBM38-201ENST00000342690 BTBD2Q9BX70 525 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 SERHL2Q9H4I8 314 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 KLHL1Q9NR64 748 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 EXD2Q9NVH0 621 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 GMEB1Q9Y692 573 aa20.21■□□□□ 0.83
RBM38-201ENST00000342690 TLN1Q9Y490 2541 aaKnown RBP20.21■□□□□ 0.83
RBM38-201ENST00000342690 GXYLT2A0PJZ3 443 aa20.2■□□□□ 0.82
RBM38-201ENST00000342690 SP1P08047 785 aa20.2■□□□□ 0.82
RBM38-201ENST00000342690 OR12D1P0DN82 309 aa20.2■□□□□ 0.82
RBM38-201ENST00000342690 CD46P15529 392 aa20.2■□□□□ 0.82
RBM38-201ENST00000342690 NAGAP17050 411 aa20.2■□□□□ 0.82
RBM38-201ENST00000342690 PIGAP37287 484 aa20.2■□□□□ 0.82
RBM38-201ENST00000342690 CPA2P48052 419 aa20.2■□□□□ 0.82
RBM38-201ENST00000342690 MRPS22P82650 360 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms