RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 TIFAQ96CG3 184 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 TOX2Q96NM4 488 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 ABCG5Q9H222 651 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 NUDT15Q9NV35 164 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 TAS2R7Q9NYW3 318 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 SLC22A5O76082 557 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 UBXN7O94888 489 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 SLC2A10O95528 541 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 HLA-DPB1P04440 258 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 ZNF250P15622 560 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 TMEM91Q6ZNR0 172 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 DNAJA4Q8WW22 397 aaPredicted RBP21.02■□□□□ 0.96
TRIM28-202ENST00000341753 ING5Q8WYH8 240 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 SECISBP2Q96T21 854 aaKnown RBP21.02■□□□□ 0.96
TRIM28-202ENST00000341753 CDCP1Q9H5V8 836 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 ISG20L2Q9H9L3 353 aaKnown RBP21.02■□□□□ 0.96
TRIM28-202ENST00000341753 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.02■□□□□ 0.968e-8■□□□□ 8.8
TRIM28-202ENST00000341753 PRELID1Q9Y255 219 aa21.02■□□□□ 0.96
TRIM28-202ENST00000341753 GLOD5A6NK44 160 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 FAM170BA6NMN3 283 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 K7ESM1 405 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 PPM1DO15297 605 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 EEF1E1O43324 174 aaKnown RBP21.01■□□□□ 0.95
TRIM28-202ENST00000341753 GNSP15586 552 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 SLC6A1P30531 599 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 AP2S1P53680 142 aaPredicted RBP21.01■□□□□ 0.95
TRIM28-202ENST00000341753 FAM20CQ8IXL6 584 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 LRRC56Q8IYG6 542 aaPredicted RBP21.01■□□□□ 0.95
TRIM28-202ENST00000341753 LRRC20Q8TCA0 184 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 ZSWIM3Q96MP5 696 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 THAP7Q9BT49 309 aaPredicted RBP21.01■□□□□ 0.95
TRIM28-202ENST00000341753 P2RX2Q9UBL9 471 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 CLEC4AQ9UMR7 237 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 I3L521 148 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 EIF4EP06730 217 aaKnown RBP21.01■□□□□ 0.95
TRIM28-202ENST00000341753 SSTR2P30874 369 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 DUSP6Q16828 381 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 ENTPD8Q5MY95 495 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 FAM27D1Q5T7N8 215 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 ZNF680Q8NEM1 530 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 ZFPM2Q8WW38 1151 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 SMG7Q92540 1137 aaKnown RBP21.01■□□□□ 0.95
TRIM28-202ENST00000341753 TBX5Q99593 518 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 IMP3Q9NV31 184 aaKnown RBP21.01■□□□□ 0.95
TRIM28-202ENST00000341753 EVA1BQ9NVM1 165 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 MRPS18AQ9NVS2 196 aaKnown RBP21.01■□□□□ 0.95
TRIM28-202ENST00000341753 ZNF624Q9P2J8 865 aaPredicted RBP21.01■□□□□ 0.95
TRIM28-202ENST00000341753 SLC9A8Q9Y2E8 581 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 CHD9Q3L8U1 2897 aa21.01■□□□□ 0.95
TRIM28-202ENST00000341753 CPSF4LA6NMK7 179 aaKnown RBP21■□□□□ 0.95
TRIM28-202ENST00000341753 TMPRSS11DO60235 418 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 CTSLP07711 333 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 ACP5P13686 325 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 CXCL3P19876 107 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 METAP1P53582 386 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 PRMT2P55345 433 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 DCDC1P59894 354 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 PRAMEF14Q5SWL7 426 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 PRAMEF13Q5VWM6 474 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 TEX261Q6UWH6 196 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 CD300LDQ6UXZ3 194 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 LRRC17Q8N6Y2 441 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 ZNF655Q8N720 491 aaPredicted RBP21■□□□□ 0.95
TRIM28-202ENST00000341753 ANKRD53Q8N9V6 530 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 SLC35G5Q96KT7 338 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 SLC38A2Q96QD8 506 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 ZFP64Q9NPA5 681 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 ENAMQ9NRM1 1142 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 CUEDC1Q9NWM3 386 aaPredicted RBP21■□□□□ 0.95
TRIM28-202ENST00000341753 PTGFRNQ9P2B2 879 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 NTNG1Q9Y2I2 539 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 CSNK1G3Q9Y6M4 447 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 U3KQ87 197 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 FAM183AA6NL82 134 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 SHOXO15266 292 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 MOSPD3O75425 235 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 CHRM4P08173 479 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 NDUFA9Q16795 377 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 CDONQ4KMG0 1287 aa21■□□□□ 0.95
TRIM28-202ENST00000341753 BPHLQ86WA6 291 aaPredicted RBP21■□□□□ 0.95
TRIM28-202ENST00000341753 ZCCHC3Q9NUD5 404 aaKnown RBP21■□□□□ 0.95
TRIM28-202ENST00000341753 LOC105369274A0A096LPK9 316 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 SNTNA6NMZ2 147 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 ELFN1P0C7U0 828 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 LINC00271P0C7V0 271 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 TRIM23P36406 574 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 ATP12AP54707 1039 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 EOGTQ5NDL2 527 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 GPR135Q8IZ08 494 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 OR4N4Q8N0Y3 316 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 OR4Q3Q8NH05 313 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 IRF7Q92985 503 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 C11orf49Q9H6J7 331 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 NEUROD4Q9HD90 331 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 ISYNA1Q9NPH2 558 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 ING4Q9UNL4 249 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 ZC3H12DA2A288 527 aaKnown RBP20.99■□□□□ 0.95
TRIM28-202ENST00000341753 B8ZZF3 427 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 PDGFAP04085 211 aa20.99■□□□□ 0.95
TRIM28-202ENST00000341753 UBL4AP11441 157 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms