RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 FNDC7Q5VTL7 733 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 BICRALQ6AI39 1079 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZNF585AQ6P3V2 769 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 TMEM107Q6UX40 140 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 LARP4Q71RC2 724 aaKnown RBP eCLIP12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 NUDCD3Q8IVD9 361 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 MARVELD2Q8N4S9 558 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 NATD1Q8N6N6 113 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 OR5M9Q8NGP3 310 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 OR2T11Q8NH01 316 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 PPP1R14CQ8TAE6 165 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 PPCDCQ96CD2 204 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 ELP4Q96EB1 424 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 GNRHR2Q96P88 292 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 TTYH2Q9BSA4 534 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 C3orf14Q9HBI5 128 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 Q9N2J8 555 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 ACSS1Q9NUB1 689 aaPredicted RBP12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 SPRR3Q9UBC9 169 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 OR10H1Q9Y4A9 318 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 HRH3Q9Y5N1 445 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 PTGDR2Q9Y5Y4 395 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 NOTCH2Q04721 2471 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 PHF3Q92576 2039 aaKnown RBP12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 C15orf38-AP3S2A0A0A6YYH1 394 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 AHRRA9YTQ3 701 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 UPK1AO00322 258 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 PIP5K1BO14986 540 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 TSPAN2O60636 221 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 LYPLA1O75608 230 aaPredicted RBP12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 CBR3O75828 277 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 TRAPPC6AO75865 159 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZWINTO95229 277 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 CREB1P16220 341 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 GRNP28799 593 aaKnown RBP12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 PTPN6P29350 595 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 HPCAL1P37235 193 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 FRKP42685 505 aaPredicted RBP12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 SERPINB4P48594 390 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 PSMD4P55036 377 aaKnown RBP12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 CORO7P57737 925 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 PSG6Q00889 435 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 PMPCAQ10713 525 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 GALNTL6Q49A17 601 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 VPS26BQ4G0F5 336 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 C1orf185Q5T7R7 199 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 BRICD5Q6PL45 260 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 ANGPTL8Q6UXH0 198 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 NPSR1Q6W5P4 371 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZCCHC23Q6ZST2 131 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 RETREG3Q86VR2 466 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 SLC44A2Q8IWA5 706 aaPredicted RBP12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 LILRB4Q8NHJ6 448 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 CEP70Q8NHQ1 597 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 RNF138Q8WVD3 245 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 PGM2Q96G03 612 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 EGLN2Q96KS0 407 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 TSSK3Q96PN8 268 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 NODALQ96S42 347 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 ADOQ96SZ5 270 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 SPOCK3Q9BQ16 436 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 SLC6A15Q9H2J7 730 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 HHATLQ9HCP6 504 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 ABCG2Q9UNQ0 655 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 RNF6Q9Y252 685 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 WIF1Q9Y5W5 379 aa12.18□□□□□ -0.46
SIRPB3P-201ENST00000340424 NINQ8N4C6 2090 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 TMEM233B4DJY2 109 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 HSPA4LO95757 839 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 ACTL6AO96019 429 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 SERPINE1P05121 402 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 GLI4P10075 376 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 PRPS2P11908 318 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 BCKDHAP12694 445 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 GRK2P25098 689 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 GPC1P35052 558 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 PTGDSP41222 190 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 MANFP55145 182 aaKnown RBP12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 NUP107P57740 925 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 CRYZQ08257 329 aaKnown RBP12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 MAD2L1Q13257 205 aaPredicted RBP12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 MLC1Q15049 377 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 TOMM20Q15388 145 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 DECR1Q16698 335 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 PRSS53Q2L4Q9 553 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 SMU1Q2TAY7 513 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 TNFAIP8L3Q5GJ75 292 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 CEP85LQ5SZL2 805 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 RIPPLY2Q5TAB7 128 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 VASNQ6EMK4 673 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 NCCRP1Q6ZVX7 275 aaPredicted RBP12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 EXOC3L1Q86VI1 746 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 ULK2Q8IYT8 1036 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 GOLGA6L1Q8N7Z2 621 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 LMF2Q9BU23 707 aaKnown RBP12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 PRDM14Q9GZV8 571 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 ANKRA2Q9H9E1 313 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 GALNT9Q9HCQ5 603 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 KCNJ16Q9NPI9 418 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 ATAD3AQ9NVI7 634 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms