RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 SNX18Q96RF0 628 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 SDHCQ99643 169 aaPredicted RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 TIMM29Q9BSF4 260 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 TRAF4Q9BUZ4 470 aaPredicted RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 POLR2J2Q9GZM3 115 aaKnown RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 KLHL25Q9H0H3 589 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 POLR2J3Q9H1A7 115 aaKnown RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 LHX9Q9NQ69 397 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 SEC14L3Q9UDX4 400 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 PNMA8BQ9ULN7 279 aaPredicted RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 SCML1Q9UN30 329 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 EXOSC1Q9Y3B2 195 aaKnown RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 SNX11Q9Y5W9 270 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 NINQ8N4C6 2090 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 CFAP47Q6ZTR5 3102 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 LOC100506127A0A0U1RQW1 187 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 PRR19A6NJB7 356 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 C10orf142B7Z368 130 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 MYL12BO14950 172 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 MID1O15344 667 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 PRODHO43272 600 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 OR10H3O60404 316 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 SEMA7AO75326 666 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 DLGAP3O95886 979 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 NTSP30990 170 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 FGF9P31371 208 aaPredicted RBP10.12□□□□□ -0.79
RTN3-201ENST00000338850 AHRP35869 848 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 TGFBR1P36897 503 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 CCT3P49368 545 aaKnown RBP10.12□□□□□ -0.79
RTN3-201ENST00000338850 SMSP52788 366 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 TPTEP56180 551 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 PSPHP78330 225 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 RUNX1T1Q06455 604 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 ASAH1Q13510 395 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 RIN1Q13671 783 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 NFE2L1Q14494 772 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 GANABQ14697 944 aaKnown RBP10.12□□□□□ -0.79
RTN3-201ENST00000338850 MINDY4Q4G0A6 757 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 FAM46CQ5VWP2 391 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 KIAA0895LQ68EN5 471 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 MRM1Q6IN84 353 aaKnown RBP10.12□□□□□ -0.79
RTN3-201ENST00000338850 CD200R1LQ6Q8B3 271 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 METAP1DQ6UB28 335 aaPredicted RBP10.12□□□□□ -0.79
RTN3-201ENST00000338850 CCBE1Q6UXH8 406 aaPredicted RBP10.12□□□□□ -0.79
RTN3-201ENST00000338850 PRICKLE2Q7Z3G6 844 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 HEATR4Q86WZ0 1026 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 MMAAQ8IVH4 418 aaKnown RBP10.12□□□□□ -0.79
RTN3-201ENST00000338850 GDPD1Q8N9F7 314 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 ANKRD53Q8N9V6 530 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 MORN4Q8NDC4 146 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 SRFBP1Q8NEF9 429 aaKnown RBP10.12□□□□□ -0.79
RTN3-201ENST00000338850 GANCQ8TET4 914 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 AP3S1Q92572 193 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 SLC25A46Q96AG3 418 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 CEP19Q96LK0 163 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 TREX2Q9BQ50 279 aaPredicted RBP10.12□□□□□ -0.79
RTN3-201ENST00000338850 ASPNQ9BXN1 380 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 HOXD1Q9GZZ0 328 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 EVA1AQ9H8M9 152 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 AMBNQ9NP70 447 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 FBXL12Q9NXK8 326 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 SSR3Q9UNL2 185 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 LIPT1Q9Y234 373 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 NCKAP1Q9Y2A7 1128 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 V9GYH0 126 aa10.12□□□□□ -0.79
RTN3-201ENST00000338850 ANKRD11Q6UB99 2663 aaPredicted RBP10.11□□□□□ -0.79
RTN3-201ENST00000338850 A0A1W2PP55 124 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 KDM4EB2RXH2 506 aaPredicted RBP10.11□□□□□ -0.79
RTN3-201ENST00000338850 H0Y8X5 98 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 K7ESM1 405 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 HAX1O00165 279 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 FLRT2O43155 660 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 B4GALT2O60909 372 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 TRIM3O75382 744 aaPredicted RBP10.11□□□□□ -0.79
RTN3-201ENST00000338850 NME6O75414 186 aaPredicted RBP10.11□□□□□ -0.79
RTN3-201ENST00000338850 HLA-DQB1P01920 261 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 NR2F6P10588 404 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 ACP2P11117 423 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 S100A1P23297 94 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 PKLRP30613 574 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 TNFSF8P32971 234 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 DDOSTP39656 456 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 GSSP48637 474 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 SLC9A3P48764 834 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 GAS1P54826 345 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 WNT4P56705 351 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 CSNK1G2P78368 415 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 CDK3Q00526 305 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 SLC13A2Q13183 592 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 KCNJ8Q15842 424 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 CCDC92Q53HC0 331 aaPredicted RBP10.11□□□□□ -0.79
RTN3-201ENST00000338850 DESI1Q6ICB0 168 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 OR4C11Q6IEV9 310 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.11□□□□□ -0.79
RTN3-201ENST00000338850 TMPRSS11AQ6ZMR5 421 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 RASSF6Q6ZTQ3 369 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 GDPD3Q7L5L3 318 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 PHC2Q8IXK0 858 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 UBQLNLQ8IYU4 475 aa10.11□□□□□ -0.79
RTN3-201ENST00000338850 PLA2G15Q8NCC3 412 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms