RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PIGAP37287 484 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 CD97P48960 835 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 POU6F2P78424 691 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 NFATC3Q12968 1075 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 NFYCQ13952 458 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 NTRK2Q16620 822 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 DUSP5Q16690 384 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 NADK2Q4G0N4 442 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 COQ5Q5HYK3 327 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 LRIF1Q5T3J3 769 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC6A19Q695T7 634 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 RPUSD3Q6P087 351 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 SNX32Q86XE0 403 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 DPP10Q8N608 796 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 BCORP1Q8N888 145 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 FAM98AQ8NCA5 519 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 MDS2Q8NDY4 140 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 OR4N2Q8NGD1 307 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 OR5M3Q8NGP4 307 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 BCAS4Q8TDM0 211 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 ZFP90Q8TF47 636 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 XAGE5Q8WWM1 108 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 PIK3R3Q92569 461 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 DIO2Q92813 273 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 CMTM5Q96DZ9 223 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 OR7D2Q96RA2 312 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 ADOQ96SZ5 270 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 G6PC3Q9BUM1 346 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 CCDC106Q9BWC9 280 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 MYLK2Q9H1R3 596 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 KLHL1Q9NR64 748 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 SACM1LQ9NTJ5 587 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 GID8Q9NWU2 228 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 THUMPD1Q9NXG2 353 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 ANAPC2Q9UJX6 822 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 CROCCQ5TZA2 2017 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 GXYLT2A0PJZ3 443 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 ASPDHA6ND91 283 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 ASNA1O43681 348 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 TSPAN2O60636 221 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 AK1P00568 194 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 OR12D1P0DN82 309 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 COX4I1P13073 169 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 CD1EP15812 388 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 ATP6V1C1P21283 382 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 LCN1P31025 176 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 CRATP43155 626 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 RFX3P48380 749 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 MAN2A2P49641 1150 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 CLK3P49761 638 aaKnown RBP10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 KHKP50053 298 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 FBXW4P57775 412 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 TBCELQ5QJ74 424 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 EXOSC6Q5RKV6 272 aaKnown RBP10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 DNAJC14Q6Y2X3 702 aaPredicted RBP10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 MDGA2Q7Z553 956 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 ZNF227Q86WZ6 799 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 RNF130Q86XS8 419 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 PSD4Q8NDX1 1056 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 FBXO30Q8TB52 745 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 FAM110BQ8TC76 370 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 SPPL2AQ8TCT8 520 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 PAQR8Q8TEZ7 354 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 CDS1Q92903 461 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 RMND5BQ96G75 393 aaPredicted RBP10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 SH3GL1Q99961 368 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 HOXD1Q9GZZ0 328 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 OR51I1Q9H343 314 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 EFCAB1Q9HAE3 211 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 MAP10Q9P2G4 905 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 CORO2BQ9UQ03 480 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 CSAG2Q9Y5P2 127 aa10.96□□□□□ -0.65
SPTLC1-202ENST00000337841 ANKRD33BA6NCL7 494 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 TMEM247A6NEH6 219 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 MRASO14807 208 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 PEX1O43933 1283 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 NME2P1O60361 137 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 UGT2B11O75310 529 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 KCNK2O95069 426 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 SNX4O95219 450 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 RASAL1O95294 804 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 NME2P22392 152 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 PTPN6P29350 595 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 PRDX6P30041 224 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 CASP9P55211 416 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 RPS26P62854 115 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 GTDC1Q4AE62 458 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 RUNDC3AQ59EK9 446 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 TNFAIP8L2Q6P589 184 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 FIGNL1Q6PIW4 674 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 DLEU7Q6UYE1 221 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 C16orf62Q7Z3J2 963 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 GALNTL5Q7Z4T8 443 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 DHDDSQ86SQ9 333 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 RETREG3Q86VR2 466 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 OR10G3Q8NGC4 313 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 OR52N2Q8NGI0 321 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 PNPT1Q8TCS8 783 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 RAB8BQ92930 207 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms