RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 F5H5P2 479 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 GSG1LQ6UXU4 331 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 LRRTM3Q86VH5 581 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 PHYKPLQ8IUZ5 450 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 GJD3Q8N144 294 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 NANPQ8TBE9 248 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 HCAR2Q8TDS4 363 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 PAQR8Q8TEZ7 354 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 TMEM175Q9BSA9 504 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 ASB4Q9Y574 426 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 CNMDO75829 334 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 SC5DO75845 299 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 VNN2O95498 520 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 FBXO45P0C2W1 286 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 ATP1B2P14415 290 aaPredicted RBP12.54□□□□□ -0.4
COL2A1-201ENST00000337299 XKR4Q5GH76 650 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 RANBP3LQ86VV4 465 aaPredicted RBP12.54□□□□□ -0.4
COL2A1-201ENST00000337299 TREX2Q9BQ50 279 aaPredicted RBP12.54□□□□□ -0.4
COL2A1-201ENST00000337299 KATNB1Q9BVA0 655 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 PINK1Q9BXM7 581 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 TMEM45AQ9NWC5 275 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 ZNF226Q9NYT6 803 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 MRTO4Q9UKD2 239 aaKnown RBP12.54□□□□□ -0.4
COL2A1-201ENST00000337299 STRCQ7RTU9 1775 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 QSOX1O00391 747 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 PRAMEF2O60811 474 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 PEX14O75381 377 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 ZNF3P17036 446 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 PRKXP51817 358 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 CLDN12P56749 244 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 OTUD1Q5VV17 481 aaPredicted RBP12.53□□□□□ -0.4
COL2A1-201ENST00000337299 RPTNQ6XPR3 784 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 COMMD6Q7Z4G1 85 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 OR56B4Q8NH76 319 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 DPYSL5Q9BPU6 564 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 EMC7Q9NPA0 242 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 FNIP2Q9P278 1114 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 BTNL2Q9UIR0 455 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 RFXAPO00287 272 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 ACSM4P0C7M7 580 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 ELK1P19419 428 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 SOX9P48436 509 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 FUT10Q6P4F1 479 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 OLIG3Q7RTU3 272 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 SDR16C5Q8N3Y7 309 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 FBXO15Q8NCQ5 510 aaPredicted RBP12.53□□□□□ -0.4
COL2A1-201ENST00000337299 GNPDA2Q8TDQ7 276 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 AUTS2Q8WXX7 1259 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 RIOK2Q9BVS4 552 aaKnown RBP12.53□□□□□ -0.4
COL2A1-201ENST00000337299 LGR4Q9BXB1 951 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 SCPEP1Q9HB40 452 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 PRSS21Q9Y6M0 314 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 MROH6A6NGR9 719 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 ACRP10323 421 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 HNF1BP35680 557 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 RAB2AP61019 212 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 PODNL1Q6PEZ8 512 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 ULK3Q6PHR2 472 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 ESPNLQ6ZVH7 1005 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 Q6ZVL8 140 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 NRMQ8IXM6 262 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 CCDC116Q8IYX3 515 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 FBXL6Q8N531 539 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 OR5D16Q8NGK9 328 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 UROC1Q96N76 676 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 S100A13Q99584 98 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 IFT22Q9H7X7 185 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 METTL8Q9H825 291 aaKnown RBP12.53□□□□□ -0.4
COL2A1-201ENST00000337299 KLHL9Q9P2J3 617 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 PPT2Q9UMR5 302 aa12.53□□□□□ -0.4
COL2A1-201ENST00000337299 LTBP4Q8N2S1 1624 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 E9PI62 339 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 PTGESO14684 152 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 ATG12O94817 140 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 RPN2P04844 631 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 GYPBP06028 91 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 UQCRC2P22695 453 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 GABRR2P28476 465 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 SLC14A1Q13336 389 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 TP53I3Q53FA7 332 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 ACSM3Q53FZ2 586 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 ARL14EPQ8N8R7 260 aaPredicted RBP12.52□□□□□ -0.4
COL2A1-201ENST00000337299 SORCS1Q8WY21 1168 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 PGAP3Q96FM1 320 aaPredicted RBP12.52□□□□□ -0.4
COL2A1-201ENST00000337299 SAMD8Q96LT4 415 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 OR2AG1Q9H205 316 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 ZNF334Q9HCZ1 680 aaPredicted RBP12.52□□□□□ -0.4
COL2A1-201ENST00000337299 CKLFQ9UBR5 152 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 TAC3Q9UHF0 121 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 F5P12259 2224 aa12.52□□□□□ -0.4
COL2A1-201ENST00000337299 MN1Q10571 1320 aaPredicted RBP12.52□□□□□ -0.4
COL2A1-201ENST00000337299 HIST1H2ABP04908 130 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 SLC35G4P0C7Q5 338 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 CFL1P23528 166 aaKnown RBP12.52□□□□□ -0.41
COL2A1-201ENST00000337299 ETV5P41161 510 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 STK19P49842 368 aaPredicted RBP12.52□□□□□ -0.41
COL2A1-201ENST00000337299 CBX2Q14781 532 aaPredicted RBP12.52□□□□□ -0.41
COL2A1-201ENST00000337299 PCGF3Q3KNV8 242 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 UNC5DQ6UXZ4 953 aa12.52□□□□□ -0.41
COL2A1-201ENST00000337299 HIST3H2AQ7L7L0 130 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms