RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SLC2A12Q8TD20 617 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 TM9SF4Q92544 642 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 LRR1Q96L50 414 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 CNN2Q99439 309 aaKnown RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 SIX2Q9NPC8 291 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 ATPIF1Q9UII2 106 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 TBX10O75333 385 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 SERPINA2P20848 420 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 RFC2P35250 354 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 RABIFP47224 123 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 OR4D1Q15615 310 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 FAM189A2Q15884 450 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 IL20RBQ6UXL0 311 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 TCEAL8Q8IYN2 117 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 HORMAD2Q8N7B1 307 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 OR5L2Q8NGL0 311 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 NANOS1Q8WY41 292 aaKnown RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 SAMD8Q96LT4 415 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 OSBPL7Q9BZF2 842 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 EXOSC1Q9Y3B2 195 aaKnown RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 NOTOA8MTQ0 251 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 RAB6AP20340 208 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 MSR1P21757 451 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 TAS2R43P59537 309 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 GPX6P59796 221 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 STEAP3Q658P3 488 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 NXPE4Q6UWF7 544 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 PLEKHG7Q6ZR37 379 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 LMNTD1Q8N9Z9 388 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 SDR9C7Q8NEX9 313 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 DNAJB8Q8NHS0 232 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 NDUFAF4Q9P032 175 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 ACTR3BQ9P1U1 418 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 TP53TG5Q9Y2B4 290 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 FAM159BA6NKW6 160 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 GRIA2P42262 883 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 RPS5P46782 204 aaKnown RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 NKX2-5P52952 324 aaPredicted RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 SIRPAP78324 504 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 ARMC1Q9NVT9 282 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 FNIP2Q9P278 1114 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 PTBP2Q9UKA9 531 aaKnown RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 TMEM184BQ9Y519 407 aaPredicted RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 IFNA17P01571 189 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 AMY2AP04746 511 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 PROS1P07225 676 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 CAPN3P20807 821 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 PIK3CBP42338 1070 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 EMX2Q04743 252 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 GPR17Q13304 367 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 ZDHHC24Q6UX98 284 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 NTAN1Q96AB6 310 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 ZMYND19Q96E35 227 aaPredicted RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 SLC41A3Q96GZ6 507 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 TSNAXQ99598 290 aaKnown RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 HEBP1Q9NRV9 189 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 TMEM184CQ9NVA4 438 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 ASF1BQ9NVP2 202 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 CNIH4Q9P003 139 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 CAMTA1Q9Y6Y1 1673 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 NFKBIEO00221 500 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 MAN2B1O00754 1011 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 PCDH17O14917 1159 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 PTPN6P29350 595 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 HNRNPH3P31942 346 aaKnown RBP10.02□□□□□ -0.8
CLN8-201ENST00000331222 WDR4P57081 412 aaKnown RBP10.02□□□□□ -0.8
CLN8-201ENST00000331222 BCL2A1Q16548 175 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 GSG1LQ6UXU4 331 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 LANCL3Q6ZV70 420 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 TMEM110Q86TL2 294 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 HS3ST5Q8IZT8 346 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 RNF175Q8N4F7 328 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 OR5AK2Q8NH90 309 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 OR1S1Q8NH92 325 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 CHPT1Q8WUD6 406 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 OR5P2Q8WZ92 322 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 TOE1Q96GM8 510 aaKnown RBP10.02□□□□□ -0.8
CLN8-201ENST00000331222 CDC6Q99741 560 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 ALOXE3Q9BYJ1 711 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 DZANK1Q9NVP4 752 aa10.02□□□□□ -0.8
CLN8-201ENST00000331222 GJE1A6NN92 205 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 KDM4EB2RXH2 506 aaPredicted RBP10.02□□□□□ -0.81
CLN8-201ENST00000331222 BMP4P12644 408 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 SEC61A1P61619 476 aaKnown RBP10.02□□□□□ -0.81
CLN8-201ENST00000331222 PTP4A2Q12974 167 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 DYRK1AQ13627 763 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 SLC22A6Q4U2R8 563 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 NDUFAF5Q5TEU4 345 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 DRICH1Q6PGQ1 229 aaPredicted RBP10.02□□□□□ -0.81
CLN8-201ENST00000331222 GPR149Q86SP6 731 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 TESQ9UGI8 421 aaKnown RBP10.02□□□□□ -0.81
CLN8-201ENST00000331222 A0A0G2JMP0 313 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 ANKRD33BA6NCL7 494 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 RDH16O75452 317 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 MPIG6BO95866 241 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 SLC2A1P11166 492 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 CHMP24386 653 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 SSTR4P31391 388 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 MC3RP41968 323 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 PITPNBP48739 271 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms