RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 TNPO3Q9Y5L0 923 aaKnown RBP13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 EXPH5Q8NEV8 1989 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 ANKDD1BA6NHY2 528 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 ALX3O95076 343 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 TGFAP01135 160 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 HNRNPH1P31943 449 aaKnown RBP13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 RPP38P78345 283 aaKnown RBP13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 IRF8Q02556 426 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 AAGABQ6PD74 315 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 SEZ6L2Q6UXD5 910 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 SLCO4C1Q6ZQN7 724 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 CHMP1BQ7LBR1 199 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 RDH11Q8TC12 318 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 FIG4Q92562 907 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 MS4A6EQ96DS6 147 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 PTCD3Q96EY7 689 aaKnown RBP13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 FBXL20Q96IG2 436 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 NT5DC2Q9H857 520 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 SERHLQ9NQF3 203 aa13.23□□□□□ -0.29
CTHRC1-201ENST00000330295 RYR3Q15413 4870 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 IQANK1A0A1B0GTG1 560 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 K7EPI3 171 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 TAPBPO15533 448 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 RIPK2O43353 540 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 DYRK3O43781 588 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 CDH16O75309 829 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 ALDOAP04075 364 aaKnown RBP13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 EPB42P16452 691 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 CERS1P27544 350 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 STT3AP46977 705 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 PIK3CGP48736 1102 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 TGM3Q08188 693 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 ZNF844Q08AG5 666 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 SLBPQ14493 270 aaKnown RBP eCLIP13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 EBPQ15125 230 aaKnown RBP13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 CCT6BQ92526 530 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 HTRA1Q92743 480 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 DGAT2Q96PD7 388 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 SERINC2Q96SA4 455 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 ATOH8Q96SQ7 321 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 PRR14Q9BWN1 585 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 CACNG6Q9BXT2 260 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 TRIM2Q9C040 744 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 OR10A4Q9H209 315 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 ACTR8Q9H981 624 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 RNF122Q9H9V4 155 aa13.22□□□□□ -0.29
CTHRC1-201ENST00000330295 HMX2A2RU54 273 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 TRIM49D1C9J1S8 452 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 UBXN8O00124 270 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 SMIM24O75264 130 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 APEHP13798 732 aaKnown RBP13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 PTNP21246 168 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 SERPINB1P30740 379 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 TMED10P49755 219 aaKnown RBP13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 PLA2G16P53816 162 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 ALDH18A1P54886 795 aaKnown RBP13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 DLG1Q12959 904 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 GGTLC2Q14390 218 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 GUSBP1Q15486 140 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 TBCCQ15814 346 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 PFKFB4Q16877 469 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 C18orf21Q32NC0 220 aaPredicted RBP13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 AWAT1Q58HT5 328 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 METTL2BQ6P1Q9 378 aaKnown RBP13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 RNF111Q6ZNA4 994 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 LCA5Q86VQ0 697 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 CENPLQ8N0S6 344 aaPredicted RBP13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 FAM216AQ8WUB2 273 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 UBTD2Q8WUN7 234 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 DCAKDQ8WVC6 231 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 SFXN2Q96NB2 322 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 TMEM79Q9BSE2 394 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 BHLHE41Q9C0J9 482 aaPredicted RBP13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 PPCSQ9HAB8 311 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 TAS2R10Q9NYW0 307 aa13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 CISD1Q9NZ45 108 aaKnown RBP13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 CPSF2Q9P2I0 782 aaKnown RBP13.21□□□□□ -0.29
CTHRC1-201ENST00000330295 LRIT2A6NDA9 550 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 ZNF500O60304 480 aaPredicted RBP13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 CLEC3AO75596 197 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 CBR3O75828 277 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 CSF3P09919 207 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 KCNC1P48547 511 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 HERVK_113P63132 956 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 ERVK-8P63133 956 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 IRF9Q00978 393 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 CHIT1Q13231 466 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 DOC2AQ14183 400 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 SLC29A2Q14542 456 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 SETDB1Q15047 1291 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 RAB35Q15286 201 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 AGAP6Q5VW22 663 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 SHISA2Q6UWI4 295 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 DGAT2L6Q6ZPD8 337 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 FAM214BQ7L5A3 538 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 SRFBP1Q8NEF9 429 aaKnown RBP13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 C7orf57Q8NEG2 295 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 ESAMQ96AP7 390 aa13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 PPWD1Q96BP3 646 aaKnown RBP13.2□□□□□ -0.3
CTHRC1-201ENST00000330295 WDR34Q96EX3 536 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms