RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 KCTD9Q7L273 389 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 SPATA6Q9NWH7 488 aaPredicted RBP15.72■□□□□ 0.11
PACS1-201ENST00000320580 ZNF225Q9UK10 706 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 ALDH1A1P00352 501 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 SNRPBP14678 240 aaKnown RBP15.72■□□□□ 0.11
PACS1-201ENST00000320580 CRYBB2P43320 205 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 UNC5DQ6UXZ4 953 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 ZNF546Q86UE3 836 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 CAMK1GQ96NX5 476 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 SLC6A20Q9NP91 592 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 POMT2Q9UKY4 750 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 LIPT1Q9Y234 373 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 ATAD5Q96QE3 1844 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 ATXN1LP0C7T5 689 aaKnown RBP15.72■□□□□ 0.11
PACS1-201ENST00000320580 CBSLP0DN79 551 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 ZNF30P17039 623 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 CBSP35520 551 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 THPOP40225 353 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 MFSD13AQ14CX5 517 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 KLHL26Q53HC5 615 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 RNF44Q7L0R7 432 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 GJD3Q8N144 294 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 PAQR8Q8TEZ7 354 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 OSTF1Q92882 214 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 ISG20Q96AZ6 181 aaKnown RBP15.72■□□□□ 0.11
PACS1-201ENST00000320580 TMEM19Q96HH6 336 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 CXCL16Q9H2A7 254 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 FBXO10Q9UK96 956 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 ARAP2Q8WZ64 1704 aa15.72■□□□□ 0.11
PACS1-201ENST00000320580 A0A0G2JN53 185 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 GABRR3A8MPY1 467 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 SEC23BQ15437 767 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 FAM69AQ5T7M9 428 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 HBMQ6B0K9 141 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 BAIAP2L2Q6UXY1 529 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 ARMC10Q8N2F6 343 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 DUSP18Q8NEJ0 188 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 NDRG3Q9UGV2 375 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 CSNK1G3Q9Y6M4 447 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 TRDV1A0A1B0GX56 115 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 TRABD2BA6NFA1 517 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 M0R3H8 397 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 AGPAT2O15120 278 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 ACP2P11117 423 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 GJA5P36382 358 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 B2MP61769 119 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 KCNJ10P78508 379 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 FABP5Q01469 135 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 PDZK1IP1Q13113 114 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 PEA15Q15121 130 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 SLC16A13Q7RTY0 426 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 ABI3BPQ7Z7G0 1075 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 OAFQ86UD1 273 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 OR5D16Q8NGK9 328 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 BRI3BPQ8WY22 251 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 CXorf58Q96LI9 332 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 C20orf85Q9H1P6 137 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 RPS10P5Q9NQ39 176 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 PCDHGA9Q9Y5G4 932 aaKnown RBP15.71■□□□□ 0.11
PACS1-201ENST00000320580 UCHL1P09936 223 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 HSD3B1P14060 373 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 CXCL3P19876 107 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 TIA1P31483 386 aaKnown RBP eCLIP15.71■□□□□ 0.11
PACS1-201ENST00000320580 HNF1BP35680 557 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 HACD4Q5VWC8 232 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 OR5M3Q8NGP4 307 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 CD300LFQ8TDQ1 290 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 OTUB2Q96DC9 234 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 S100A13Q99584 98 aa15.71■□□□□ 0.11
PACS1-201ENST00000320580 ARID1AO14497 2285 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 SSR2P43308 183 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 AP1S2P56377 157 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 TAS2R43P59537 309 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 C3orf38Q5JPI3 329 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 OTUD1Q5VV17 481 aaPredicted RBP15.71■□□□□ 0.1
PACS1-201ENST00000320580 PRSS45Q7RTY3 260 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 FAM122BQ7Z309 247 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 ARRDC2Q8TBH0 407 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 FAIM2Q9BWQ8 316 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 PPT2Q9UMR5 302 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 FLVCR2Q9UPI3 526 aa15.71■□□□□ 0.1
PACS1-201ENST00000320580 TUBAL3A6NHL2 446 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 SLC9B1P1A6NJY1 282 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 ANHXE9PGG2 379 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 ADAM12O43184 909 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 OAZ2O95190 189 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 TSPAN12O95859 305 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 PIPP12273 146 aaPredicted RBP15.7■□□□□ 0.1
PACS1-201ENST00000320580 PTBP1P26599 531 aaKnown RBP eCLIP15.7■□□□□ 0.15e-8■■■■■ 27
PACS1-201ENST00000320580 SLC14A1Q13336 389 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 DOC2AQ14183 400 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 CTSL3PQ5NE16 218 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 SPRYD7Q5W111 196 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 GPR142Q7Z601 462 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 CCDC71Q8IV32 467 aaPredicted RBP15.7■□□□□ 0.1
PACS1-201ENST00000320580 GNPDA2Q8TDQ7 276 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 MIXL1Q9H2W2 232 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 CNIH4Q9P003 139 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 ADH7P40394 386 aa15.7■□□□□ 0.1
PACS1-201ENST00000320580 SLC1A3P43003 542 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms