RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SP9P0CG40 484 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 POLR2IP36954 125 aaKnown RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 CLK3P49761 638 aaKnown RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 TPD52P55327 224 aaPredicted RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 CCL7P80098 99 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 GANABQ14697 944 aaKnown RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 PROX2Q3B8N5 592 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 LIN52Q52LA3 116 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 DCST1Q5T197 706 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 DEF8Q6ZN54 512 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 OLIG3Q7RTU3 272 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 WDR53Q7Z5U6 358 aaPredicted RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 GALNT5Q7Z7M9 940 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 RBM45Q8IUH3 476 aaKnown RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 EID2Q8N6I1 236 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 OR6T1Q8NGN1 323 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 VANGL1Q8TAA9 524 aaPredicted RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 ZG16BQ96DA0 208 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 LOXL4Q96JB6 756 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 HRASLS5Q96KN8 279 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 VSTM2LQ96N03 204 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 RBCK1Q9BYM8 510 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 POLR2J2Q9GZM3 115 aaKnown RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 POLR2J3Q9H1A7 115 aaKnown RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 FOLH1BQ9HBA9 442 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF304Q9HCX3 659 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 FSCN3Q9NQT6 498 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 MGAT4BQ9UQ53 548 aa16.61■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF443Q9Y2A4 671 aaPredicted RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 HEMK1Q9Y5R4 338 aaPredicted RBP16.61■□□□□ 0.25
RAB39A-201ENST00000320578 IGKV3D-11A0A0A0MRZ8 115 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 A8MU76 341 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 M0R3H8 397 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 BRINP1O60477 761 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 UGT2B17O75795 530 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 SEC24DO94855 1032 aaPredicted RBP16.6■□□□□ 0.25
RAB39A-201ENST00000320578 ADAP00813 363 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 RPLP0P05388 317 aaKnown RBP16.6■□□□□ 0.25
RAB39A-201ENST00000320578 ELAVL4P26378 380 aaKnown RBP16.6■□□□□ 0.25
RAB39A-201ENST00000320578 HLCSP50747 726 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 CXCR4P61073 352 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 ERV3-1Q14264 604 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 C6orf141Q5SZD1 244 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 VRK2Q86Y07 508 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 TOR1AIP2Q8NFQ8 470 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 GPR151Q8TDV0 419 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF566Q969W8 418 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 WFDC6Q9BQY6 131 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 FNDC11Q9BVV2 318 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 NECTIN3Q9NQS3 549 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 CHST2Q9Y4C5 530 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 GMPPBQ9Y5P6 360 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 PI4KAP42356 2102 aa16.6■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF883P0CG24 379 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 FBLP22087 321 aaKnown RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 ALAS2P22557 587 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 IFNA8P32881 189 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 GABRA3P34903 492 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 NUP107P57740 925 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 CD47Q08722 323 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 ZNF155Q12901 538 aaPredicted RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 NPTX1Q15818 432 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 ZSWIM7Q19AV6 140 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 RHBDD2Q6NTF9 364 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 CNDP2Q96KP4 475 aaKnown RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 DGCR6LQ9BY27 220 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 MKKSQ9NPJ1 570 aaPredicted RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 PRODH2Q9UF12 536 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 BLOC1S6Q9UL45 172 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 MKLN1Q9UL63 735 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 SDK1Q7Z5N4 2213 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 TRBV4-1A0A0J9YWV2 114 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 HYAL3O43820 417 aaPredicted RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 NME6O75414 186 aaPredicted RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 CDC123O75794 336 aaPredicted RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 LINGO3P0C6S8 592 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 CCDC159P0C7I6 412 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 MAOAP21397 527 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 TRHRP34981 398 aaPredicted RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 GABARAPL2P60520 117 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 ESRRGP62508 458 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 EEF1A1P68104 462 aaKnown RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 RPP38P78345 283 aaKnown RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 PSG6Q00889 435 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 RAPSNQ13702 412 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 RNF220Q5VTB9 566 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 TMPRSS9Q7Z410 1059 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 BPHLQ86WA6 291 aaPredicted RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 METTL27Q8N6F8 245 aaPredicted RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 OIT3Q8WWZ8 545 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 QRSL1Q9H0R6 528 aaKnown RBP16.59■□□□□ 0.25
RAB39A-201ENST00000320578 ARMC7Q9H6L4 198 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 RLIMQ9NVW2 624 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 NDOR1Q9UHB4 597 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 PCDHGB2Q9Y5G2 931 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 MAU2Q9Y6X3 613 aa16.59■□□□□ 0.25
RAB39A-201ENST00000320578 IGHV5-10-1A0A0J9YXX1 117 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 SH3PXD2BA1X283 911 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 PATE3B3GLJ2 98 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 KCNK2O95069 426 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms