RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TIGD4Q8IY51 512 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 OR4E2Q8NGC2 313 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 GTPBP2Q9BX10 602 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 ZCCHC3Q9NUD5 404 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 B3GNT2Q9NY97 397 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 KIF26AQ9ULI4 1882 aaPredicted RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 M0R3H8 397 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 PGRMC2O15173 223 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 RPN2P04844 631 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 FAM157BP0CG42 384 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 UQCRC2P22695 453 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 RNF144AP50876 292 aaPredicted RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 PIN1Q13526 163 aaPredicted RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 FLYWCH1Q4VC44 716 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 KLHDC8AQ8IYD2 350 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 C9orf62Q8N4C0 152 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 SYT14Q8NB59 555 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 GEMIN6Q8WXD5 167 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 PMEPA1Q969W9 287 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 COL26A1Q96A83 441 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 CXorf40BQ96DE9 158 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 CAMK1GQ96NX5 476 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 QRFPRQ96P65 431 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 SLC7A5P2Q9GIP4 190 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 DNAJC27Q9NZQ0 273 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 LOC102723532A0A0G2JNH3 316 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 ISM1B1AKI9 464 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 OR10H3O60404 316 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 ANXA8P13928 327 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 CTRB1P17538 263 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 MAP2K3P46734 347 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 NCBP2P52298 156 aaKnown RBP eCLIP14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 SNTA1Q13424 505 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 LASP1Q14847 261 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 ZNF630Q2M218 657 aaPredicted RBP14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 CTRB2Q6GPI1 263 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 ZNF793Q6ZN11 406 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 RTL10Q7L3V2 364 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 UBE3DQ7Z6J8 389 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 NUDT13Q86X67 352 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 GDPD1Q8N9F7 314 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 OR9Q1Q8NGQ5 310 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 BBS4Q96RK4 519 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 PIP5K1AQ99755 562 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 B3GAT2Q9NPZ5 323 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 PHPT1Q9NRX4 125 aaPredicted RBP14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 TXNL4BQ9NX01 149 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 SEC14L3Q9UDX4 400 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 STUB1Q9UNE7 303 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 HYKKA2RU49 373 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 POM121BA6NF01 834 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 C4orf51C9J302 202 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 ARAFP10398 606 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 NR2F1P10589 423 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 RPL3P39023 403 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 DUSP6Q16828 381 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 ZBTB37Q5TC79 503 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 OR52E1Q8NGJ3 308 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 GOT1L1Q8NHS2 421 aaPredicted RBP14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 CCL4L1Q8NHW4 92 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 RGMAQ96B86 450 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 MSLNLQ96KJ4 702 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 POLR2J2Q9GZM3 115 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 SYNPO2LQ9H987 977 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 CNOT2Q9NZN8 540 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 MAPRE3Q9UPY8 281 aa14.62□□□□□ -0.07
SHROOM1-201ENST00000319854 I3L521 148 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 FFAR1O14842 300 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 FRS3O43559 492 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 SDC2P34741 201 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 BCL6P41182 706 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 TFF2Q03403 129 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 EEF1A2Q05639 463 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 C18orf63Q68DL7 685 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 PHC2Q8IXK0 858 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 OR8H3Q8N146 312 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 GALNT6Q8NCL4 622 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 NMNAT1Q9HAN9 279 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 ING3Q9NXR8 418 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 SEC14L4Q9UDX3 406 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 EML2O95834 649 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 SLC9A3P48764 834 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 CDC42P60953 191 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 RRAS2P62070 204 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 TAGLNQ01995 201 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 RHAGQ02094 409 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 PCDH1Q08174 1060 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 OR2A1Q8NGT9 310 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 RAB7BQ96AH8 199 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 DCLRE1CQ96SD1 692 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 MENTQ9BUN1 341 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 AICDAQ9GZX7 198 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 PPIL3Q9H2H8 161 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 NKX2-4Q9H2Z4 354 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 SLC25A19Q9HC21 320 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 FGF22Q9HCT0 170 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 MRPS30Q9NP92 439 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 CLN6Q9NWW5 311 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 UCKL1Q9NWZ5 548 aa14.61□□□□□ -0.07
SHROOM1-201ENST00000319854 FTSJ1Q9UET6 329 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms