RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ZBTB11O95625 1053 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-201ENST00000315286 SLC35E2P0CK97 266 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 MMP11P24347 488 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 TRHRP34981 398 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-201ENST00000315286 MAT1AQ00266 395 aaKnown RBP17.12■□□□□ 0.33
CCDC43-201ENST00000315286 TEKQ02763 1124 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 GPR68Q15743 365 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 SVOPQ8N4V2 548 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 CDRT4Q8N9R6 151 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 RAB2BQ8WUD1 216 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 PEX11GQ96HA9 241 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 GUCD1Q96NT3 240 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 ASXL3Q9C0F0 2248 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 CACNA1IQ9P0X4 2223 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 CPSF4LA6NMK7 179 aaKnown RBP17.12■□□□□ 0.33
CCDC43-201ENST00000315286 CLCA1A8K7I4 914 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 CYP7B1O75881 506 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 TP53P04637 393 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-201ENST00000315286 ALDH4A1P30038 563 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 C21orf33P30042 268 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-201ENST00000315286 MVKQ03426 396 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 NDUFA9Q16795 377 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 PTCHD4Q6ZW05 846 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 PEX5LQ8IYB4 626 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 SDR16C5Q8N3Y7 309 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 ZNF285Q96NJ3 590 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 GPA33Q99795 319 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 TRIM45Q9H8W5 580 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-201ENST00000315286 C11orf16Q9NQ32 467 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 PRDM6Q9NQX0 595 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 SEMA4GQ9NTN9 838 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 FKBP14Q9NWM8 211 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 FBXO34Q9NWN3 711 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 SOHLH2Q9NX45 425 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 KLHL28Q9NXS3 571 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 SELENONQ9NZV5 590 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 KLHL3Q9UH77 587 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 ZNF232Q9UNY5 417 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 PLCL2Q9UPR0 1127 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 NTNG1Q9Y2I2 539 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 IFT52Q9Y366 437 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 MYO15AQ9UKN7 3530 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 HYKKA2RU49 373 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 RHPN2P1A8MT19 583 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 H3BN98 237 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 RNH1P13489 461 aaKnown RBP17.11■□□□□ 0.33
CCDC43-201ENST00000315286 CCNA2P20248 432 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 NR4A1P22736 598 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 MAP3K8P41279 467 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 MLLT3P42568 568 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-201ENST00000315286 C21orf59P57076 290 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 DYNC1I2Q13409 638 aaKnown RBP17.11■□□□□ 0.33
CCDC43-201ENST00000315286 ERV3-1Q14264 604 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 SYT16Q17RD7 645 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 DCST2Q5T1A1 773 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 SYT6Q5T7P8 510 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-201ENST00000315286 C1orf94Q6P1W5 598 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 ZCCHC12Q6PEW1 402 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 ZNF836Q6ZNA1 936 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 SLC16A12Q6ZSM3 486 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 COX18Q8N8Q8 333 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 DIO2Q92813 273 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 ZNF350Q9GZX5 532 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 DUSP22Q9NRW4 184 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 IRAK4Q9NWZ3 460 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 GPR83Q9NYM4 423 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 RNF215Q9Y6U7 377 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 A0A087WUU8 490 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 TLCD2A6NGC4 264 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 AGAP5A6NIR3 686 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 TGFBR3LH3BV60 316 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 BCAT2O15382 392 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-201ENST00000315286 OR10H2O60403 315 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 CDC123O75794 336 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-201ENST00000315286 CBX7O95931 251 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 CCNYL3P0C7X3 344 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 RGS8P57771 180 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-201ENST00000315286 SLC13A2Q13183 592 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 DUSP8Q13202 625 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 MAPK14Q16539 360 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 LINC00471Q8N535 108 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 GPR151Q8TDV0 419 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 STACQ99469 402 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 LRIT1Q9P2V4 623 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 SIT1Q9Y3P8 196 aa17.11■□□□□ 0.33
CCDC43-201ENST00000315286 STX11O75558 287 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 NTN1O95631 604 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 IFI6P09912 130 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 TNNI3P19429 210 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 GABRA3P34903 492 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 FNTBP49356 437 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 NFATC3Q12968 1075 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 FAM53BQ14153 422 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 LARS2Q15031 903 aaKnown RBP17.1■□□□□ 0.33
CCDC43-201ENST00000315286 ENTPD8Q5MY95 495 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 SLX4IPQ5VYV7 408 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 CD300LDQ6UXZ3 194 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 MEX3DQ86XN8 651 aaKnown RBP17.1■□□□□ 0.33
CCDC43-201ENST00000315286 ZNF619Q8N2I2 560 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 VWA5B2Q8N398 1253 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms