RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 OR2AJ1Q8NGZ0 328 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 LRR1Q96L50 414 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 GABRG3Q99928 467 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 CD93Q9NPY3 652 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ABCD2Q9UBJ2 740 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 DKKL1Q9UK85 242 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ABCG2Q9UNQ0 655 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 SLC22A1O15245 554 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 RBMS1P29558 406 aaKnown RBP12.85□□□□□ -0.35
DDX54-202ENST00000314045 TRIM23P36406 574 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 MZT2BQ6NZ67 158 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 TMEM184AQ6ZMB5 413 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ATOH1Q92858 354 aaPredicted RBP12.85□□□□□ -0.35
DDX54-202ENST00000314045 ERVK-18Q9QC07 812 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 TMPRSS11DO60235 418 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 RPP14O95059 124 aaKnown RBP12.85□□□□□ -0.35
DDX54-202ENST00000314045 ETHE1O95571 254 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 CPNE6O95741 557 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ST6GAL1P15907 406 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 MYF6P23409 242 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 OMPP47874 163 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 HLCSP50747 726 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 COX20Q5RI15 118 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 TMEM225Q6GV28 225 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ASB12Q8WXK4 309 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 MND1Q9BWT6 205 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 BRD7Q9NPI1 651 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 IL20RAQ9UHF4 553 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ZNF225Q9UK10 706 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 SPAG17Q6Q759 2223 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 SCRG1O75711 98 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 MT-ND2P03891 347 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 OSMP13725 252 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 MANEAQ5SRI9 462 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 LILRA2Q8N149 483 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 FBXL6Q8N531 539 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 TOR1AIP2Q8NFQ8 470 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 NEURL3Q96EH8 262 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 TIMMDC1Q9NPL8 285 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 A8MVJ9 347 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 GNALP38405 381 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 TFF2Q03403 129 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 DSG2Q14126 1118 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 VRK2Q86Y07 508 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 GPER1Q99527 375 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 COQ7Q99807 217 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 BTBD2Q9BX70 525 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 DCSTAMPQ9H295 470 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 A0A1W2PRG6 482 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 LDOC1O95751 146 aaPredicted RBP12.84□□□□□ -0.35
DDX54-202ENST00000314045 ACPPP15309 386 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 DNASE1L1P49184 302 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
DDX54-202ENST00000314045 DDI2Q5TDH0 399 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 GARNL3Q5VVW2 1013 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 TMEM236Q5W0B7 351 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 GPAT4Q86UL3 456 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 ATCAYQ86WG3 371 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 PTRH1Q86Y79 214 aaKnown RBP12.84□□□□□ -0.35
DDX54-202ENST00000314045 ZNF547Q8IVP9 402 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 UBASH3BQ8TF42 649 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 ZNF597Q96LX8 424 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 TMEM121BQ9BXQ6 578 aaPredicted RBP12.84□□□□□ -0.35
DDX54-202ENST00000314045 ANKRD60Q9BZ19 345 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 WASH6PQ9NQA3 447 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 SLC39A1Q9NY26 324 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 CNIH4Q9P003 139 aa12.84□□□□□ -0.35
DDX54-202ENST00000314045 PLGP00747 810 aaPredicted RBP12.83□□□□□ -0.35
DDX54-202ENST00000314045 STSP08842 583 aa12.83□□□□□ -0.35
DDX54-202ENST00000314045 IL9P15248 144 aa12.83□□□□□ -0.35
DDX54-202ENST00000314045 MAGEA8P43361 318 aa12.83□□□□□ -0.35
DDX54-202ENST00000314045 GPLD1P80108 840 aa12.83□□□□□ -0.35
DDX54-202ENST00000314045 VLDLRP98155 873 aa12.83□□□□□ -0.35
DDX54-202ENST00000314045 GPR19Q15760 415 aa12.83□□□□□ -0.35
DDX54-202ENST00000314045 UXS1Q8NBZ7 420 aa12.83□□□□□ -0.35
DDX54-202ENST00000314045 THEM6Q8WUY1 208 aa12.83□□□□□ -0.35
DDX54-202ENST00000314045 PISDQ9UG56 409 aa12.83□□□□□ -0.35
DDX54-202ENST00000314045 HSPE1-MOB4S4R3N1 261 aa12.83□□□□□ -0.35
DDX54-202ENST00000314045 A0A1W2PR48 441 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 GXYLT2A0PJZ3 443 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 BLACEA4D250 179 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 CLDN25C9JDP6 229 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 FAM227AF5H4B4 570 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 SLC1A7O00341 560 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 YKT6O15498 198 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 BRINP1O60477 761 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 SDC2P34741 201 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 FAM219BQ5XKK7 198 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 USP43Q70EL4 1123 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 MARCH9Q86YJ5 346 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 GID4Q8IVV7 300 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 OR5T3Q8NGG3 340 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 PPP1R14AQ96A00 147 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 ELP4Q96EB1 424 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 CDX2Q99626 313 aaPredicted RBP12.83□□□□□ -0.36
DDX54-202ENST00000314045 LIN28AQ9H9Z2 209 aaKnown RBP12.83□□□□□ -0.36
DDX54-202ENST00000314045 TRIM36Q9NQ86 728 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 DAPP1Q9UN19 280 aa12.83□□□□□ -0.36
DDX54-202ENST00000314045 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms