RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CNOT3O75175 753 aaKnown RBP20.93■□□□□ 0.94
IRF3-201ENST00000309877 DDAH2O95865 285 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 SLC5A2P31639 672 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 SLC37A1P57057 533 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 KCNC4Q03721 635 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 ZNF311Q5JNZ3 666 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 TYW3Q6IPR3 259 aaKnown RBP20.93■□□□□ 0.94
IRF3-201ENST00000309877 FIGNL1Q6PIW4 674 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 ANKRD37Q7Z713 158 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 HMGN2P46Q86SG4 172 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 ZNF321PQ8N8H1 164 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 GPR32P1Q8NGA4 272 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 RMND5BQ96G75 393 aaPredicted RBP20.93■□□□□ 0.94
IRF3-201ENST00000309877 SLC46A1Q96NT5 459 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 SPSB2Q99619 263 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 DDA1Q9BW61 102 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 ZNF350Q9GZX5 532 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 QRSL1Q9H0R6 528 aaKnown RBP20.93■□□□□ 0.94
IRF3-201ENST00000309877 WDR54Q9H977 334 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 COPS7AQ9UBW8 275 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 CNOT11Q9UKZ1 510 aaKnown RBP20.93■□□□□ 0.94
IRF3-201ENST00000309877 C15orf41Q9Y2V0 281 aa20.93■□□□□ 0.94
IRF3-201ENST00000309877 FER1L5A0AVI2 2057 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 E2F6O75461 281 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 STK17BO94768 372 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 DIRAS1O95057 198 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 IFNW1P05000 195 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 PABPC4LP0CB38 370 aaKnown RBP20.92■□□□□ 0.94
IRF3-201ENST00000309877 PEX5LQ8IYB4 626 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 MORN4Q8NDC4 146 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 ZNF721Q8TF20 911 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 PINK1Q9BXM7 581 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 ITPAQ9BY32 194 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 THSD1Q9NS62 852 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 IFT52Q9Y366 437 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 OR10H1Q9Y4A9 318 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 LRRC42Q9Y546 428 aa20.92■□□□□ 0.94
IRF3-201ENST00000309877 SPEGQ15772 3267 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 PDLIM1O00151 329 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 KCNK2O95069 426 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 ZIC2O95409 532 aaPredicted RBP20.91■□□□□ 0.94
IRF3-201ENST00000309877 IGKV3-11P04433 115 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 CYC1P08574 325 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 TRHRP34981 398 aaPredicted RBP20.91■□□□□ 0.94
IRF3-201ENST00000309877 AQP4P55087 323 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 GPR68Q15743 365 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 PPP4R4Q6NUP7 873 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 EPHX4Q8IUS5 362 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 ZNF619Q8N2I2 560 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 CBR4Q8N4T8 237 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 OR52P1PQ8NH57 321 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 SDCCAG3Q96C92 435 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 ZG16BQ96DA0 208 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 ZNF347Q96SE7 839 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 POLE3Q9NRF9 147 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 NDUFAF4Q9P032 175 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 SLC13A4Q9UKG4 626 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 ZNF232Q9UNY5 417 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 FAM32AQ9Y421 112 aaKnown RBP20.91■□□□□ 0.94
IRF3-201ENST00000309877 AK5Q9Y6K8 562 aa20.91■□□□□ 0.94
IRF3-201ENST00000309877 TEX51A0A1B0GUA7 166 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 SOCS2O14508 198 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 BRINP1O60477 761 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 ZNF26P17031 533 aaPredicted RBP20.9■□□□□ 0.94
IRF3-201ENST00000309877 ATP6V1C1P21283 382 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 RFX3P48380 749 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 TAF11Q15544 211 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 NRF1Q16656 503 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 IQCCQ4KMZ1 466 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 TMEM164Q5U3C3 297 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 NPSR1Q6W5P4 371 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 CARM1Q86X55 608 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 ZDHHC13Q8IUH4 622 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 PACRGLQ8N7B6 248 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 ZNF300Q96RE9 604 aaPredicted RBP20.9■□□□□ 0.94
IRF3-201ENST00000309877 SLC29A1Q99808 456 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 NUDT9Q9BW91 350 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 AMBRA1Q9C0C7 1298 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 C8orf4Q9NR00 106 aa20.9■□□□□ 0.94
IRF3-201ENST00000309877 C19orf25Q9UFG5 118 aaPredicted RBP20.9■□□□□ 0.94
IRF3-201ENST00000309877 IGHV3-20A0A0C4DH32 117 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 PMS2P1A4D2B8 440 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 PRAMEF25A6NGN4 478 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 ACOX3O15254 700 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 CT45A8P0DMV1 189 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 CT45A9P0DMV2 189 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 PUM1Q14671 1186 aaKnown RBP eCLIP20.89■□□□□ 0.94
IRF3-201ENST00000309877 NNATQ16517 81 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 CT45A2Q5DJT8 189 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 FAM198BQ6UWH4 519 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 C6orf15Q6UXA7 325 aaPredicted RBP20.89■□□□□ 0.94
IRF3-201ENST00000309877 VRK2Q86Y07 508 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 SVOPLQ8N434 492 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 OR4N2Q8NGD1 307 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 OR1N1Q8NGS0 311 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 OR5K1Q8NHB7 308 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 WDR36Q8NI36 951 aaKnown RBP20.89■□□□□ 0.94
IRF3-201ENST00000309877 PMM1Q92871 262 aa20.89■□□□□ 0.94
IRF3-201ENST00000309877 RSPO3Q9BXY4 272 aaPredicted RBP20.89■□□□□ 0.94
IRF3-201ENST00000309877 SAP130Q9H0E3 1048 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms