RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 CDC42EP4Q9H3Q1 356 aaKnown RBP11.03□□□□□ -0.64
TPT1-201ENST00000309246 NMRK1Q9NWW6 199 aa11.03□□□□□ -0.64
TPT1-201ENST00000309246 C6orf203Q9P0P8 240 aaPredicted RBP11.03□□□□□ -0.64
TPT1-201ENST00000309246 EIF3LQ9Y262 564 aaKnown RBP11.03□□□□□ -0.64
TPT1-201ENST00000309246 TESMINQ9Y4I5 508 aa11.03□□□□□ -0.64
TPT1-201ENST00000309246 TRIM49D1C9J1S8 452 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 RNF223E7ERA6 249 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 MANBAO00462 879 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 SIAH2O43255 324 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 ZIC3O60481 467 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 TSPAN2O60636 221 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 CTAGE8P0CG41 777 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 CT45A8P0DMV1 189 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 CT45A9P0DMV2 189 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 CHMP24386 653 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 DPP4P27487 766 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 IL12BP29460 328 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 KRT20P35900 424 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 EFR3AQ14156 821 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 ERCC6LQ2NKX8 1250 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 CT45A2Q5DJT8 189 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 SHEQ5VZ18 495 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 VWA1Q6PCB0 445 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 SCIMPQ6UWF3 145 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 CLEC9AQ6UXN8 241 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 LARP4Q71RC2 724 aaKnown RBP eCLIP11.02□□□□□ -0.653e-29■□□□□ 9.8
TPT1-201ENST00000309246 TAOK1Q7L7X3 1001 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 P4HA3Q7Z4N8 544 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 CTAGE4Q8IX94 777 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 UBQLNLQ8IYU4 475 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 CDYL2Q8N8U2 506 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 CNEP1R1Q8N9A8 125 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 OR4K17Q8NGC6 315 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 UHMK1Q8TAS1 419 aaKnown RBP11.02□□□□□ -0.65
TPT1-201ENST00000309246 EFHD2Q96C19 240 aaPredicted RBP11.02□□□□□ -0.65
TPT1-201ENST00000309246 VSTM2LQ96N03 204 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 ZNF395Q9H8N7 513 aaPredicted RBP11.02□□□□□ -0.65
TPT1-201ENST00000309246 FOLH1BQ9HBA9 442 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 KLHL28Q9NXS3 571 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 VPS29Q9UBQ0 182 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 NDRG3Q9UGV2 375 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 MCM8Q9UJA3 840 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 DLGAP4Q9Y2H0 992 aa11.02□□□□□ -0.65
TPT1-201ENST00000309246 POC1B-GALNT4F8VUJ3 575 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 MSTNO14793 375 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 SCO2O43819 266 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 PCDH7O60245 1069 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 BCAS2O75934 225 aaPredicted RBP11.01□□□□□ -0.65
TPT1-201ENST00000309246 COL6A2P12110 1019 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 HSD17B3P37058 310 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 HTR6P50406 440 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 SERPINB9P50453 376 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 GAS1P54826 345 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 B3GALT5-AS1P59052 145 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 SIRPAP78324 504 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 RAE1P78406 368 aaKnown RBP11.01□□□□□ -0.65
TPT1-201ENST00000309246 CLCQ05315 142 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 FAM27E3Q08E93 113 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 CSTF3Q12996 717 aaKnown RBP11.01□□□□□ -0.65
TPT1-201ENST00000309246 TUSC1Q2TAM9 212 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 Q5PR19 223 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 TEX35Q5T0J7 233 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 P3H2Q8IVL5 708 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 SLC44A2Q8IWA5 706 aaPredicted RBP11.01□□□□□ -0.65
TPT1-201ENST00000309246 TMEM151AQ8N4L1 468 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 OR7G2Q8NG99 324 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 OR4N2Q8NGD1 307 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 DCAKDQ8WVC6 231 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 RNF138Q8WVD3 245 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 STARD4Q96DR4 205 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 DTNBP1Q96EV8 351 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 WFIKKN1Q96NZ8 548 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 FAM111AQ96PZ2 611 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 C1QTNF3Q9BXJ4 246 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 EBPLQ9BY08 206 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 FUT8Q9BYC5 575 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 ACPTQ9BZG2 426 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 OPN3Q9H1Y3 402 aaPredicted RBP11.01□□□□□ -0.65
TPT1-201ENST00000309246 PPP4R1LQ9P1A2 415 aa11.01□□□□□ -0.65
TPT1-201ENST00000309246 MRPS18CQ9Y3D5 142 aaKnown RBP11.01□□□□□ -0.65
TPT1-201ENST00000309246 GNG14A0A1W2PPG7 69 aa11□□□□□ -0.65
TPT1-201ENST00000309246 SLC22A20A6NK97 555 aa11□□□□□ -0.65
TPT1-201ENST00000309246 DEFB108AA8MXU0 73 aa11□□□□□ -0.65
TPT1-201ENST00000309246 H0YC42 278 aa11□□□□□ -0.65
TPT1-201ENST00000309246 ARHGEF9O43307 516 aa11□□□□□ -0.65
TPT1-201ENST00000309246 CTIFO43310 598 aaKnown RBP11□□□□□ -0.65
TPT1-201ENST00000309246 SUPT7LO94864 414 aa11□□□□□ -0.65
TPT1-201ENST00000309246 KRT6AP02538 564 aa11□□□□□ -0.65
TPT1-201ENST00000309246 KRT6BP04259 564 aa11□□□□□ -0.65
TPT1-201ENST00000309246 HSD3B1P14060 373 aa11□□□□□ -0.65
TPT1-201ENST00000309246 HSD3B2P26439 372 aa11□□□□□ -0.65
TPT1-201ENST00000309246 HMOX2P30519 316 aa11□□□□□ -0.65
TPT1-201ENST00000309246 CCKARP32238 428 aa11□□□□□ -0.65
TPT1-201ENST00000309246 CD79BP40259 229 aa11□□□□□ -0.65
TPT1-201ENST00000309246 KRT6CP48668 564 aa11□□□□□ -0.65
TPT1-201ENST00000309246 PNLIPRP2P54317 469 aa11□□□□□ -0.65
TPT1-201ENST00000309246 TPD52P55327 224 aaPredicted RBP11□□□□□ -0.65
TPT1-201ENST00000309246 EEF1A1P68104 462 aaKnown RBP11□□□□□ -0.65
TPT1-201ENST00000309246 CKAP4Q07065 602 aaKnown RBP11□□□□□ -0.65
TPT1-201ENST00000309246 ACSM2AQ08AH3 577 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms