RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PARD6BQ9BYG5 372 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 GIMAP2Q9UG22 337 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 RAB21Q9UL25 225 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 TRAF6Q9Y4K3 522 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 MED12LQ86YW9 2145 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 C15orf38-AP3S2A0A0A6YYH1 394 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 PIP5K1BO14986 540 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 RGS14O43566 566 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 ABCB7O75027 752 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 REM1O75628 298 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 TRAPPC6AO75865 159 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 TUBBP07437 444 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 NEFHP12036 1026 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 PNLIPRP2P54317 469 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 WNT3P56703 355 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 KRTAP10-9P60411 292 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 RPL38P63173 70 aaKnown RBP18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 IFFO1Q0D2I5 559 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 RIPPLY2Q5TAB7 128 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 ZNF551Q7Z340 670 aaPredicted RBP18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 WDR53Q7Z5U6 358 aaPredicted RBP18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 SLC44A2Q8IWA5 706 aaPredicted RBP18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 CLYBLQ8N0X4 340 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 GFM2Q969S9 779 aaKnown RBP18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 CIDECQ96AQ7 238 aaPredicted RBP18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 WDYHV1Q96HA8 205 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 C3orf30Q96M34 536 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 LMF2Q9BU23 707 aaKnown RBP18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 RTN4RQ9BZR6 473 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 OR2B2Q9GZK3 357 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 IQCGQ9H095 443 aaKnown RBP18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 SERHLQ9NQF3 203 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 TAS2R9Q9NYW1 312 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 FLRT3Q9NZU0 649 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 BAIAP2L1Q9UHR4 511 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 MAPRE3Q9UPY8 281 aa18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 TEP1Q99973 2627 aaKnown RBP18.05■□□□□ 0.48
PDZRN3-202ENST00000308537 ANKRD17O75179 2603 aaKnown RBP18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 EPPINO95925 133 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 BPGMP07738 259 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 CYP4B1P13584 511 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 CEACAM8P31997 349 aaPredicted RBP18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 ZFP36L2P47974 494 aaKnown RBP18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 MEX3BQ6ZN04 569 aaKnown RBP18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 YRDCQ86U90 279 aaKnown RBP18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 LIX1Q8N485 282 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 EFHD2Q96C19 240 aaPredicted RBP18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 GIMAP5Q96F15 307 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 C14orf79Q96F83 325 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 TSSK3Q96PN8 268 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 REEP4Q9H6H4 257 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 ALKBH4Q9NXW9 302 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 KLRF1Q9NZS2 232 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 NTMQ9P121 344 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 ZDHHC2Q9UIJ5 367 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 FBXL2Q9UKC9 423 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 WIF1Q9Y5W5 379 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 AKAP6Q13023 2319 aa18.04■□□□□ 0.48
PDZRN3-202ENST00000308537 AHRRA9YTQ3 701 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 FADS1O60427 444 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 COQ9O75208 318 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 BCKDHAP12694 445 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 NTSP30990 170 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 GFRA1P56159 465 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 DLX5P56178 289 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 PSPHP78330 225 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 ZNF155Q12901 538 aaPredicted RBP18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 GAB1Q13480 694 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 EXOSC6Q5RKV6 272 aaKnown RBP18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 LARP4Q71RC2 724 aaKnown RBP eCLIP18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 PLCZ1Q86YW0 608 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 RELL2Q8NC24 303 aaPredicted RBP18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 TNIP2Q8NFZ5 429 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 CLHC1Q8NHS4 586 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 TMCO6Q96DC7 493 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 LURAP1Q96LR2 239 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 G6PC3Q9BUM1 346 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 RUBCNLQ9H714 662 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 KCNJ16Q9NPI9 418 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 SENP1Q9P0U3 644 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 TMED5Q9Y3A6 229 aa18.03■□□□□ 0.48
PDZRN3-202ENST00000308537 CBR3O75828 277 aa18.02■□□□□ 0.48
PDZRN3-202ENST00000308537 SERPINB5P36952 375 aa18.02■□□□□ 0.48
PDZRN3-202ENST00000308537 EFR3AQ14156 821 aa18.02■□□□□ 0.48
PDZRN3-202ENST00000308537 CYP27C1Q4G0S4 372 aa18.02■□□□□ 0.48
PDZRN3-202ENST00000308537 SH2D4BQ5SQS7 431 aa18.02■□□□□ 0.48
PDZRN3-202ENST00000308537 ADGRE4PQ86SQ3 457 aa18.02■□□□□ 0.48
PDZRN3-202ENST00000308537 DMRTC2Q8IXT2 367 aaPredicted RBP18.02■□□□□ 0.48
PDZRN3-202ENST00000308537 FADS6Q8N9I5 356 aa18.02■□□□□ 0.48
PDZRN3-202ENST00000308537 OR10Q1Q8NGQ4 319 aa18.02■□□□□ 0.48
PDZRN3-202ENST00000308537 DDX18Q9NVP1 670 aaKnown RBP18.02■□□□□ 0.48
PDZRN3-202ENST00000308537 PDPK1O15530 556 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 AKAP10O43572 662 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 ZIC3O60481 467 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 IGKV1D-16P01601 117 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 DHRS4L1P0CG22 281 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 EVI2BP34910 448 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 TIMP3P35625 211 aa18.01■□□□□ 0.47
PDZRN3-202ENST00000308537 B3GALT5-AS1P59052 145 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms