RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FRRS1Q6ZNA5 592 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 LANCL3Q6ZV70 420 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PIWIL3Q7Z3Z3 882 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 TMEM179BQ7Z7N9 219 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PIP4P1Q86T03 277 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 GALNT4Q8N4A0 578 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 AMER2Q8N7J2 671 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF321PQ8N8H1 164 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF615Q8N8J6 731 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CDRT4Q8N9R6 151 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 STT3BQ8TCJ2 826 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PIK3R3Q92569 461 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 TMBIM1Q969X1 311 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ZG16BQ96DA0 208 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 LIN37Q96GY3 246 aaPredicted RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 VSTM2LQ96N03 204 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 COL21A1Q96P44 957 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 TRNT1Q96Q11 434 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 STACQ99469 402 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 WFDC6Q9BQY6 131 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 MESP1Q9BRJ9 268 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PELOQ9BRX2 385 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CNPPD1Q9BV87 410 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 VCX3BQ9H321 246 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PIGUQ9H490 435 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 YY1AP1Q9H869 796 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 FBXO8Q9NRD0 319 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 FBXO34Q9NWN3 711 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 DNAJB9Q9UBS3 223 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 MKL2Q9ULH7 1088 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PADI2Q9Y2J8 665 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF451Q9Y4E5 1061 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 HEMK1Q9Y5R4 338 aaPredicted RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 MAGED1Q9Y5V3 778 aaPredicted RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 WDFY3Q8IZQ1 3526 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 NINQ8N4C6 2090 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 A0A0G2JPF8 293 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 C7orf72A4D263 438 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 DUXAA6NLW8 204 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 C17orf105B2RV13 164 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 HNRNPCL2B2RXH8 293 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 HNRNPCL3B7ZW38 293 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CPNE3O75131 537 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 COQ9O75208 318 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PDE9AO76083 593 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 NKX2-2O95096 273 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 IFNA14P01570 189 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 FESP07332 822 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 HBQ1P09105 142 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ALOX5P09917 674 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ZGLP1P0C6A0 271 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 HNRNPCL4P0DMR1 293 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ETS2P15036 469 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 HOXB6P17509 224 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 KCNJ5P48544 419 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 BIKQ13323 160 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 NRF1Q16656 503 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ARHGAP11BQ3KRB8 267 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 SWT1Q5T5J6 900 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ATAD3BQ5T9A4 648 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 MLIPQ5VWP3 458 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ZCCHC12Q6PEW1 402 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 NPSR1Q6W5P4 371 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 C16orf62Q7Z3J2 963 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 BPHLQ86WA6 291 aaPredicted RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ARMC8Q8IUR7 673 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CBR4Q8N4T8 237 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ZSCAN1Q8NBB4 408 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CHDHQ8NE62 594 aaPredicted RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PLPP5Q8NEB5 264 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CATSPER1Q8NEC5 780 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 OR4D11Q8NGI4 311 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 C16orf52Q8NHV5 167 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 SPPL2AQ8TCT8 520 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 NAF1Q96HR8 494 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF607Q96SK3 696 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 SDF2Q99470 211 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CDC6Q99741 560 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 LMF2Q9BU23 707 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 BDH2Q9BUT1 245 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 BTBD2Q9BX70 525 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 AMBRA1Q9C0C7 1298 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 OR10A5Q9H207 317 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 SOX17Q9H6I2 414 aaPredicted RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 DUSP22Q9NRW4 184 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 EXD2Q9NVH0 621 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 NDUFAF4Q9P032 175 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CNOT11Q9UKZ1 510 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 LIPT1Q9Y234 373 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 LOXL2Q9Y4K0 774 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CENPVL1A0A0U1RR11 272 aa6.46□□□□□ -1.38
PTCD2-201ENST00000308077 TEX51A0A1B0GUA7 166 aa6.46□□□□□ -1.38
PTCD2-201ENST00000308077 A0A1W2PNU3 283 aaPredicted RBP6.46□□□□□ -1.38
PTCD2-201ENST00000308077 VSTM2BA6NLU5 285 aa6.46□□□□□ -1.38
PTCD2-201ENST00000308077 B4E171 279 aa6.46□□□□□ -1.38
PTCD2-201ENST00000308077 J3KTA2 159 aa6.46□□□□□ -1.38
PTCD2-201ENST00000308077 MEN1O00255 615 aa6.46□□□□□ -1.38
PTCD2-201ENST00000308077 DLGAP1O14490 977 aa6.46□□□□□ -1.38
PTCD2-201ENST00000308077 EI24O14681 340 aa6.46□□□□□ -1.38
PTCD2-201ENST00000308077 PRAMEF2O60811 474 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms