RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 PEX5LQ8IYB4 626 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 GPR32P1Q8NGA4 272 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 OR5K1Q8NHB7 308 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 SLC46A1Q96NT5 459 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 BTBD9Q96Q07 612 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 DEPDC7Q96QD5 511 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 ZNF300Q96RE9 604 aaPredicted RBP16.29■□□□□ 0.2
KRT28-201ENST00000306658 PINK1Q9BXM7 581 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 OR8D2Q9GZM6 311 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 ZNF350Q9GZX5 532 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 Q9N2J8 555 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 NDUFAF4Q9P032 175 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 GPN3Q9UHW5 284 aaPredicted RBP16.29■□□□□ 0.2
KRT28-201ENST00000306658 NXT1Q9UKK6 140 aaKnown RBP16.29■□□□□ 0.2
KRT28-201ENST00000306658 MKLN1Q9UL63 735 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 ZNF232Q9UNY5 417 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 NINQ8N4C6 2090 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 CSO75390 466 aaKnown RBP16.28■□□□□ 0.2
KRT28-201ENST00000306658 ITIH1P19827 911 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 TNFRSF1BP20333 461 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 EMP2P54851 167 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 SLC37A1P57057 533 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 WLSQ5T9L3 541 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 TYW3Q6IPR3 259 aaKnown RBP16.28■□□□□ 0.2
KRT28-201ENST00000306658 MORN4Q8NDC4 146 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 SLC2A12Q8TD20 617 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 TAAR9Q96RI9 348 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 SAP130Q9H0E3 1048 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 SOX17Q9H6I2 414 aaPredicted RBP16.28■□□□□ 0.2
KRT28-201ENST00000306658 REEP1Q9H902 201 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 WDR54Q9H977 334 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 TOR4AQ9NXH8 423 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 COPS7AQ9UBW8 275 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 SLC9A8Q9Y2E8 581 aa16.28■□□□□ 0.2
KRT28-201ENST00000306658 ADAMDEC1O15204 470 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 ALOX12BO75342 701 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 DIRAS1O95057 198 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 DDAH2O95865 285 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 CLPSP04118 112 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 IGKV3-11P04433 115 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 GUSBP08236 651 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 JMJD7P0C870 316 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 ATP6V1C1P21283 382 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 DNAJA1P31689 397 aaKnown RBP16.27■□□□□ 0.2
KRT28-201ENST00000306658 TRHRP34981 398 aaPredicted RBP16.27■□□□□ 0.2
KRT28-201ENST00000306658 EIF3IQ13347 325 aaKnown RBP16.27■□□□□ 0.2
KRT28-201ENST00000306658 PUM1Q14671 1186 aaKnown RBP eCLIP16.27■□□□□ 0.2
KRT28-201ENST00000306658 LARS2Q15031 903 aaKnown RBP16.27■□□□□ 0.2
KRT28-201ENST00000306658 CCNJQ5T5M9 372 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 AP1ARQ63HQ0 302 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 MRPL14Q6P1L8 145 aaKnown RBP16.27■□□□□ 0.2
KRT28-201ENST00000306658 STK32CQ86UX6 486 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 HIPK1Q86Z02 1210 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 ZNF619Q8N2I2 560 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 OR52P1PQ8NH57 321 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 ZNF721Q8TF20 911 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 APOBEC4Q8WW27 367 aaKnown RBP16.27■□□□□ 0.2
KRT28-201ENST00000306658 MR1Q95460 341 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 AMBRA1Q9C0C7 1298 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 QRSL1Q9H0R6 528 aaKnown RBP16.27■□□□□ 0.2
KRT28-201ENST00000306658 C3orf18Q9UK00 162 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 SLC13A4Q9UKG4 626 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 B3GALT1Q9Y5Z6 326 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 AK5Q9Y6K8 562 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 ENPP4Q9Y6X5 453 aa16.27■□□□□ 0.2
KRT28-201ENST00000306658 GXYLT2A0PJZ3 443 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 PRAMEF25A6NGN4 478 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 C9J4A7 227 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 SYT5O00445 386 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 BRINP1O60477 761 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 KCNK2O95069 426 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 ZIC2O95409 532 aaPredicted RBP16.27■□□□□ 0.19
KRT28-201ENST00000306658 LGI1O95970 557 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 RHCEP18577 417 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 PRKAR1BP31321 381 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 SLC5A2P31639 672 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 DCTP40126 519 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 IST1P53990 364 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 GPR68Q15743 365 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 CMPK2Q5EBM0 449 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 OTUD3Q5T2D3 398 aaPredicted RBP16.27■□□□□ 0.19
KRT28-201ENST00000306658 FAAH2Q6GMR7 532 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 LCN10Q6JVE6 187 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 SHQ1Q6PI26 577 aaKnown RBP16.27■□□□□ 0.19
KRT28-201ENST00000306658 FIGNL1Q6PIW4 674 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 DHRS13Q6UX07 377 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 LANCL3Q6ZV70 420 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 ZG16BQ96DA0 208 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 RMND5BQ96G75 393 aaPredicted RBP16.27■□□□□ 0.19
KRT28-201ENST00000306658 NAF1Q96HR8 494 aaKnown RBP16.27■□□□□ 0.19
KRT28-201ENST00000306658 ZNF597Q96LX8 424 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 G6PC3Q9BUM1 346 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 DDA1Q9BW61 102 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 RSPO3Q9BXY4 272 aaPredicted RBP16.27■□□□□ 0.19
KRT28-201ENST00000306658 KLHL28Q9NXS3 571 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 DTX4Q9Y2E6 619 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 SAMHD1Q9Y3Z3 626 aaKnown RBP16.27■□□□□ 0.19
KRT28-201ENST00000306658 OR10H1Q9Y4A9 318 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 U3KQV3 271 aa16.27■□□□□ 0.19
KRT28-201ENST00000306658 CUL9Q8IWT3 2517 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms