RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CNEP1R1Q8N9A8 125 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 OR5D16Q8NGK9 328 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 FANK1Q8TC84 345 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 HSPBAP1Q96EW2 488 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 ORAI3Q9BRQ5 295 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 INPP5KQ9BT40 448 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 PNPLA3Q9NST1 481 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 ANKRD10Q9NXR5 420 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 GPR160Q9UJ42 338 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 SPTA1P02549 2419 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 TPRP12270 2363 aaKnown RBP8.69□□□□□ -1.02
PTPRE-202ENST00000306042 LRIT2A6NDA9 550 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 H0YIG0 161 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 PCDH17O14917 1159 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 TAPBPO15533 448 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 ANGPTL1O95841 491 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 MESP2Q0VG99 397 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 EEF1A1P5Q5VTE0 462 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 WDR53Q7Z5U6 358 aaPredicted RBP8.69□□□□□ -1.02
PTPRE-202ENST00000306042 OR4C15Q8NGM1 316 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 OSTF1Q92882 214 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF597Q96LX8 424 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 PLGRKTQ9HBL7 147 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 SLC7A8Q9UHI5 535 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 LOC105369274A0A096LPK9 316 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 PRAMEF33A0A0G2JMD5 474 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 LOC102723532A0A0G2JNH3 316 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 G3V3Y1 287 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 DDAH2O95865 285 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 CD160O95971 181 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 B3GALT4O96024 378 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 TACSTD2P09758 323 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 DHRS4L1P0CG22 281 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 CSNK2A1P68400 391 aaPredicted RBP8.69□□□□□ -1.02
PTPRE-202ENST00000306042 KLHL22Q53GT1 634 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 LACTB2Q53H82 288 aaPredicted RBP8.69□□□□□ -1.02
PTPRE-202ENST00000306042 COQ5Q5HYK3 327 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 TPRG1LQ5T0D9 272 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 FAM111BQ6SJ93 734 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 TMPRSS9Q7Z410 1059 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 KRT77Q7Z794 578 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 CLEC14AQ86T13 490 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 OR4N4Q8N0Y3 316 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 OR5T3Q8NGG3 340 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 GNPDA2Q8TDQ7 276 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 PIK3R3Q92569 461 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 MAL2Q969L2 176 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 LCORQ96JN0 433 aaPredicted RBP8.69□□□□□ -1.02
PTPRE-202ENST00000306042 ADAD1Q96M93 576 aaKnown RBP8.69□□□□□ -1.02
PTPRE-202ENST00000306042 DENND2DQ9H6A0 471 aaPredicted RBP8.69□□□□□ -1.02
PTPRE-202ENST00000306042 TAS2R10Q9NYW0 307 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 MGAT4BQ9UQ53 548 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 TRPM6Q9BX84 2022 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 NPIPA5A0A0B4J1W7 369 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 NPIPA7E9PJI5 369 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 TBX1O43435 398 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 NPIPA8P0DM63 369 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 HK1P19367 917 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 LIM2P55344 173 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 VLDLRP98155 873 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 PRAMEF8Q5VWM4 474 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 PRAMEF7Q5VXH5 474 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 GRAMD2AQ8IUY3 354 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 METTL25Q8N6Q8 603 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 C1GALT1C1Q96EU7 318 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 SENP5Q96HI0 755 aaPredicted RBP8.69□□□□□ -1.02
PTPRE-202ENST00000306042 EBF2Q9HAK2 575 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 BATF3Q9NR55 127 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 TMEM45AQ9NWC5 275 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 SSR3Q9UNL2 185 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 ATG4BQ9Y4P1 393 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 SLC22A7Q9Y694 548 aa8.69□□□□□ -1.02
PTPRE-202ENST00000306042 EP300Q09472 2414 aaPredicted RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 EIF1AYO14602 144 aaKnown RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 LSM1O15116 133 aaKnown RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 HEXAP06865 529 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 TPOP07202 933 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 B4GALNT1Q00973 533 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 TLE3Q04726 772 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 SLC35F1Q5T1Q4 408 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 LRIF1Q5T3J3 769 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 DNAJA4Q8WW22 397 aaPredicted RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 MS4A6EQ96DS6 147 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 C1orf21Q9H246 121 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 ERVMER34-1Q9H9K5 563 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 PCDHGB5Q9Y5G0 923 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 TRAPPC13A5PLN9 417 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 OR2T1O43869 369 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 SOX14O95416 240 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 PCBP4P57723 403 aaKnown RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 GTDC1Q4AE62 458 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 CCNJQ5T5M9 372 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 UEVLDQ8IX04 471 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 OR4D9Q8NGE8 314 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 TMBIM1Q969X1 311 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 OMA1Q96E52 524 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 IL4I1Q96RQ9 567 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 TBX5Q99593 518 aa8.68□□□□□ -1.02
PTPRE-202ENST00000306042 WDR83Q9BRX9 315 aaKnown RBP8.68□□□□□ -1.02
PTPRE-202ENST00000306042 ZC4H2Q9NQZ6 224 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms