RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PARS2Q7L3T8 475 aaKnown RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 ZNF627Q7L945 461 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 OLIG3Q7RTU3 272 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 PRSS58Q8IYP2 241 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 PRRC1Q96M27 445 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 CUEDC1Q9NWM3 386 aaPredicted RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 PCDHGA4Q9Y5G9 962 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 MAU2Q9Y6X3 613 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 TRBV2A0A0J9YWF9 115 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 HMGA1P17096 107 aaKnown RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 AHRP35869 848 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 RPS25P62851 125 aaKnown RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 DEFA5Q01523 94 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 PIP5KL1Q5T9C9 394 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 MTFR2Q6P444 385 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 ZNF767PQ75MW2 155 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 TMED4Q7Z7H5 227 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 OR2A12Q8NGT7 310 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 TRMT10AQ8TBZ6 339 aaKnown RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 CDADC1Q9BWV3 514 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 RBCK1Q9BYM8 510 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 QRSL1Q9H0R6 528 aaKnown RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 GABARAPL1Q9H0R8 117 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 C11orf54Q9H0W9 315 aaPredicted RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 CXXC1Q9P0U4 656 aaPredicted RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 CACNA1CQ13936 2221 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 ZNF670-ZNF695F2Z2N8 137 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 ECDO95905 644 aaPredicted RBP12.54□□□□□ -0.4
DDX54-201ENST00000306014 ADRB3P13945 408 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 RAB3BP20337 219 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 GNALP38405 381 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 TAP2Q03519 686 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 LRIT3Q3SXY7 679 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 FLYWCH1Q4VC44 716 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 C8orf82Q6P1X6 216 aaPredicted RBP12.54□□□□□ -0.4
DDX54-201ENST00000306014 PTOV1Q86YD1 416 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 ADAMTS19Q8TE59 1207 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 RAD9AQ99638 391 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 KXD1Q9BQD3 176 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 LYARQ9NX58 379 aaKnown RBP12.54□□□□□ -0.4
DDX54-201ENST00000306014 HCN3Q9P1Z3 774 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 ANTXRLA6NF34 631 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 NDUFS1P28331 727 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 RAB28P51157 221 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 ILKQ13418 452 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 SF3A2Q15428 464 aaKnown RBP12.54□□□□□ -0.4
DDX54-201ENST00000306014 SLC16A12Q6ZSM3 486 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 PEG10Q86TG7 708 aaKnown RBP12.54□□□□□ -0.4
DDX54-201ENST00000306014 CCDC36Q8IYA8 594 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 LRRC25Q8N386 305 aaPredicted RBP12.54□□□□□ -0.4
DDX54-201ENST00000306014 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 OR9A2Q8NGT5 310 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 OR2T35Q8NGX2 323 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 THEM6Q8WUY1 208 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 SLC25A36Q96CQ1 311 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 C5orf34Q96MH7 638 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 SNX18Q96RF0 628 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 PKMYT1Q99640 499 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 IL23AQ9NPF7 189 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 UBQLN2Q9UHD9 624 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 ZNF639Q9UID6 485 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 OSGIN1Q9UJX0 560 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 A0A1W2PP55 124 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 TFPIP10646 304 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 POLR2CP19387 275 aaPredicted RBP12.54□□□□□ -0.4
DDX54-201ENST00000306014 GRPRP30550 384 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 VIPR2P41587 438 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 NNATQ16517 81 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 TMEM35AQ53FP2 167 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 ALG1LQ6GMV1 187 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 IL20RBQ6UXL0 311 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 THAP7Q9BT49 309 aaPredicted RBP12.54□□□□□ -0.4
DDX54-201ENST00000306014 ACER3Q9NUN7 267 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 HS3ST2Q9Y278 367 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 MED16Q9Y2X0 877 aa12.54□□□□□ -0.4
DDX54-201ENST00000306014 B4GALT2O60909 372 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 GPX5O75715 221 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 IGFBP1P08833 259 aaPredicted RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 CERS1P27544 350 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 PITPNBP48739 271 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 ELOAQ14241 798 aaKnown RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 PRSS36Q5K4E3 855 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 LCTLQ6UWM7 567 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 OR10H5Q8NGA6 315 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 CHTF18Q8WVB6 975 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 SLC7A7Q9UM01 511 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 CFL1P23528 166 aaKnown RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 MAP3K8P41279 467 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 CRYZQ08257 329 aaKnown RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 PUM1Q14671 1186 aaKnown RBP eCLIP12.53□□□□□ -0.42e-8■■■□□ 17.3
DDX54-201ENST00000306014 DPPA4Q7L190 304 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 KRT77Q7Z794 578 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 RBM45Q8IUH3 476 aaKnown RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 COQ8AQ8NI60 647 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 TMEM163Q8TC26 289 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 DTD2Q96FN9 168 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 SLIRPQ9GZT3 109 aaKnown RBP12.53□□□□□ -0.4
DDX54-201ENST00000306014 C14orf105Q9NVL8 296 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 UPB1Q9UBR1 384 aa12.53□□□□□ -0.4
DDX54-201ENST00000306014 DOCK1Q14185 1865 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms