RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TCF25Q9BQ70 676 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 C17orf62Q9BQA9 187 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 ENKD1Q9H0I2 346 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 EVA1BQ9NVM1 165 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 NUP50Q9UKX7 468 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 ARPC4-TTLL3A0A0A6YYG9 625 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 TRBC2A0A5B9 178 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 MYL12BO14950 172 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 FABP7O15540 132 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 SLC16A8O95907 504 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 FGBP02675 491 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 CATP04040 527 aaKnown RBP5.1□□□□□ -1.59
VPS50-202ENST00000305866 CD1AP06126 327 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 CHRM4P08173 479 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 MYL12AP19105 171 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 CD53P19397 219 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 RPS4Y1P22090 263 aaKnown RBP5.1□□□□□ -1.59
VPS50-202ENST00000305866 AHCYP23526 432 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 GIPRP48546 466 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 DGKEP52429 567 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 RPS13P62277 151 aaKnown RBP5.1□□□□□ -1.59
VPS50-202ENST00000305866 SNRPD2P62316 118 aaKnown RBP5.1□□□□□ -1.59
VPS50-202ENST00000305866 BDH1Q02338 343 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 RAB40BQ12829 278 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 ARHGEF7Q14155 803 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 LRRC32Q14392 662 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 FCN2Q15485 313 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 MED22Q15528 200 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 C9orf64Q5T6V5 341 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 IER5LQ5T953 404 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 TRIM40Q6P9F5 258 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 ZNF621Q6ZSS3 439 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 OAFQ86UD1 273 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 TRIM48Q8IWZ4 208 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 IQCF2Q8IXL9 164 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 EIF4E3Q8N5X7 224 aaKnown RBP5.1□□□□□ -1.59
VPS50-202ENST00000305866 TEX19Q8NA77 164 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 BBS1Q8NFJ9 593 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 TOR1AIP2Q8NFQ8 470 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 CD99L2Q8TCZ2 262 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 MOAP1Q96BY2 351 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 EGFL8Q99944 293 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 ISG20L2Q9H9L3 353 aaKnown RBP5.1□□□□□ -1.59
VPS50-202ENST00000305866 NEUROD4Q9HD90 331 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 NANSQ9NR45 359 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 ASB6Q9NWX5 421 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 IL20Q9NYY1 176 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 ST6GALNAC2Q9UJ37 374 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 FBXL3Q9UKT7 428 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 POLHQ9Y253 713 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 RHBDD3Q9Y3P4 386 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 SNX8Q9Y5X2 465 aa5.1□□□□□ -1.59
VPS50-202ENST00000305866 ZSCAN5BA6NJL1 495 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 GABRPO00591 440 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 CASC3O15234 703 aaKnown RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 CPNE3O75131 537 aaKnown RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 TMEM127O75204 238 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 OR2A4O95047 310 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 GADD45GO95257 159 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 RAB36O95755 333 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 TIMP1P01033 207 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 SYPP08247 313 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 CCNYL3P0C7X3 344 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 COX7A2P14406 83 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 CXCL2P19875 107 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 AZGP1P25311 298 aaKnown RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 UQCRC1P31930 480 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 MAP3K8P41279 467 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 MTNR1BP49286 362 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 SELENOPP49908 381 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 RAG2P55895 527 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 SCN1BQ07699 218 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 TMEM115Q12893 351 aaPredicted RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 COL9A2Q14055 689 aaPredicted RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 TAB1Q15750 504 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 WSCD2Q2TBF2 565 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 BTBD16Q32M84 506 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 ZNF684Q5T5D7 378 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 METRNLQ641Q3 311 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 WDR88Q6ZMY6 472 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 FAM83HQ6ZRV2 1179 aaPredicted RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 OVCH2Q7RTZ1 564 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 SLC43A2Q8N370 569 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 ZNF655Q8N720 491 aaPredicted RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 ZNF740Q8NDX6 193 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 OR5M3Q8NGP4 307 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 SLC5A11Q8WWX8 675 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 OR2A7Q96R45 310 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 IL4I1Q96RQ9 567 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 COQ7Q99807 217 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 TRMT61BQ9BVS5 477 aaKnown RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 SORBS1Q9BX66 1292 aaKnown RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 HCAR1Q9BXC0 346 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 BBS2Q9BXC9 721 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 TSR3Q9UJK0 312 aaKnown RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 DMDP11532 3685 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 A0A087WUU8 490 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 A0A1W2PRB8 838 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 A0A1W2PS29 197 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 OR6C70A6NIJ9 312 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms