RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 MAN2A2P49641 1150 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 NTRK2Q16620 822 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 REP15Q6BDI9 236 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 TNFAIP8L2Q6P589 184 aaPredicted RBP22.55■■□□□ 1.2
HOXC9-201ENST00000303450 DLEU7Q6UYE1 221 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 RTL4Q6ZR62 310 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 Q6ZS92 163 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 TEX19Q8NA77 164 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 PCYOX1LQ8NBM8 494 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 MDS2Q8NDY4 140 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 MIPOL1Q8TD10 442 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 CDS1Q92903 461 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 CMTM5Q96DZ9 223 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 RMND5BQ96G75 393 aaPredicted RBP22.55■■□□□ 1.2
HOXC9-201ENST00000303450 SLC35A4Q96G79 324 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 C5orf34Q96MH7 638 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 OR51I1Q9H343 314 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 SLC25A37Q9NYZ2 338 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 VAPAQ9P0L0 249 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 MAP10Q9P2G4 905 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.55■■□□□ 1.2
HOXC9-201ENST00000303450 B3GNT3Q9Y2A9 372 aa22.55■■□□□ 1.2
HOXC9-201ENST00000303450 CLIC1O00299 241 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 MRASO14807 208 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 SLC25A12O75746 678 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 HOXB9P17482 250 aaPredicted RBP22.54■■□□□ 1.2
HOXC9-201ENST00000303450 PIGAP37287 484 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 RFX3P48380 749 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 KHKP50053 298 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 ANXA11P50995 505 aaKnown RBP22.54■■□□□ 1.2
HOXC9-201ENST00000303450 FBXW4P57775 412 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 MRPS22P82650 360 aaKnown RBP22.54■■□□□ 1.2
HOXC9-201ENST00000303450 ZNF227Q86WZ6 799 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 MSRB3Q8IXL7 192 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 BCORP1Q8N888 145 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 ADOQ96SZ5 270 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 BTBD2Q9BX70 525 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 TIMMDC1Q9NPL8 285 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 BOD1L1Q8NFC6 3051 aa22.54■■□□□ 1.2
HOXC9-201ENST00000303450 TP53I11O14683 189 aa22.53■■□□□ 1.2
HOXC9-201ENST00000303450 AGR2O95994 175 aa22.53■■□□□ 1.2
HOXC9-201ENST00000303450 PSMD4P55036 377 aaKnown RBP22.53■■□□□ 1.2
HOXC9-201ENST00000303450 POU6F2P78424 691 aaPredicted RBP22.53■■□□□ 1.2
HOXC9-201ENST00000303450 ZNF169Q14929 603 aaPredicted RBP22.53■■□□□ 1.2
HOXC9-201ENST00000303450 NADK2Q4G0N4 442 aa22.53■■□□□ 1.2
HOXC9-201ENST00000303450 ZNF766Q5HY98 468 aa22.53■■□□□ 1.2
HOXC9-201ENST00000303450 MDGA2Q7Z553 956 aa22.53■■□□□ 1.2
HOXC9-201ENST00000303450 GOLM1Q8NBJ4 401 aa22.53■■□□□ 1.2
HOXC9-201ENST00000303450 OR10G3Q8NGC4 313 aa22.53■■□□□ 1.2
HOXC9-201ENST00000303450 EFHD2Q96C19 240 aaPredicted RBP22.53■■□□□ 1.2
HOXC9-201ENST00000303450 COL21A1Q96P44 957 aa22.53■■□□□ 1.2
HOXC9-201ENST00000303450 IGSF10Q6WRI0 2623 aa22.53■■□□□ 1.2
HOXC9-201ENST00000303450 ZFYVE26Q68DK2 2539 aa22.53■■□□□ 1.2
HOXC9-201ENST00000303450 OR6C70A6NIJ9 312 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 ASNA1O43681 348 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 ABCB7O75027 752 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 UNC5CO95185 931 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 OR12D1P0DN82 309 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 PPIBP23284 216 aaKnown RBP22.52■■□□□ 1.2
HOXC9-201ENST00000303450 PRDX6P30041 224 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 CRATP43155 626 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 PNLIPRP2P54317 469 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 TXNL4AP83876 142 aaKnown RBP22.52■■□□□ 1.2
HOXC9-201ENST00000303450 TRMT5Q32P41 509 aaKnown RBP22.52■■□□□ 1.2
HOXC9-201ENST00000303450 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.52■■□□□ 1.2
HOXC9-201ENST00000303450 SLC6A19Q695T7 634 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 SLC25A25Q6KCM7 469 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 NUP54Q7Z3B4 507 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 XAGE5Q8WWM1 108 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 DIO2Q92813 273 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 RCN3Q96D15 328 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 CGREF1Q99674 301 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 RAD21L1Q9H4I0 556 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 KLHL1Q9NR64 748 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 EXD2Q9NVH0 621 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 KCNE3Q9Y6H6 103 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 EXPH5Q8NEV8 1989 aa22.52■■□□□ 1.2
HOXC9-201ENST00000303450 SPTA1P02549 2419 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 TRBV5-3A0A0A0MS03 114 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 TSPAN2O60636 221 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 KCNK2O95069 426 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 SP1P08047 785 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 MAGEA8P43361 318 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 RPP38P78345 283 aaKnown RBP22.52■■□□□ 1.19
HOXC9-201ENST00000303450 KLRB1Q12918 225 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 EFR3AQ14156 821 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 COX20Q5RI15 118 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 ATAD3BQ5T9A4 648 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 SLC22A10Q63ZE4 541 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 FIGNL1Q6PIW4 674 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 PTRH1Q86Y79 214 aaKnown RBP22.52■■□□□ 1.19
HOXC9-201ENST00000303450 PSD4Q8NDX1 1056 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 OR52N2Q8NGI0 321 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 RAB8BQ92930 207 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 PNPLA2Q96AD5 504 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 GID8Q9NWU2 228 aa22.52■■□□□ 1.19
HOXC9-201ENST00000303450 EVPLLA8MZ36 301 aa22.51■■□□□ 1.19
HOXC9-201ENST00000303450 UGT2B11O75310 529 aa22.51■■□□□ 1.19
HOXC9-201ENST00000303450 IL33O95760 270 aa22.51■■□□□ 1.19
HOXC9-201ENST00000303450 NPPAP01160 153 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms