RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 FAM122AQ96E09 287 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ATF6BQ99941 703 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 STRADBQ9C0K7 418 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 KIAA1551Q9HCM1 1747 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ABCA4P78363 2273 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 PLSCR1O15162 318 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 PQBP1O60828 265 aaKnown RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 PRSS23O95084 383 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 PMS2P2O95744 297 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 FUCA1P04066 466 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 IL5P05113 134 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CD1AP06126 327 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 GZMKP49863 264 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CCR8P51685 355 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CDH12P55289 794 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ERVK-16P61578 105 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 DLK1P80370 383 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 RNASE12Q5GAN4 147 aaKnown RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 SLC35D3Q5M8T2 416 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 GPR148Q8TDV2 347 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 MZB1Q8WU39 189 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 SLC25A36Q96CQ1 311 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 LRFN1Q9P244 771 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 PRODH2Q9UF12 536 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 MOKQ9UQ07 419 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ACTL7AQ9Y615 435 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 DLEC1Q9Y238 1755 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 METTL15A6NJ78 407 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 FARS2O95363 451 aaKnown RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 KLK3P07288 261 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CCNOP22674 350 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CA5AP35218 305 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 TAS2R19P59542 299 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 MELKQ14680 651 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 FXNQ16595 210 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 PKDCCQ504Y2 493 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 SHFQ7M4L6 423 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CPA6Q8N4T0 437 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 TMEM163Q8TC26 289 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ASB12Q8WXK4 309 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 OR8D1Q8WZ84 308 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 GAL3ST4Q96RP7 486 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 RBM38Q9H0Z9 239 aaKnown RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 EQTNQ9NQ60 294 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ZNF69Q9UC07 566 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 FBXL4Q9UKA2 621 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 STRAPQ9Y3F4 350 aaKnown RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CACNG2Q9Y698 323 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 TEX13DA0A0J9YY54 714 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 hCG_1807616A0A1W2PRN6 198 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 TRBC2A0A5B9 178 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 MANSC4A6NHS7 340 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 OR5K4A6NMS3 321 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 FOXE1O00358 373 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 SFTPBP07988 381 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 AHCYP23526 432 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 IL1R2P27930 398 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CLCNKBP51801 687 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 NKX3-2P78367 333 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 PMS2P3Q13401 168 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 SERTAD2Q14140 314 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 POU4F3Q15319 338 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 C6orf183Q5T699 404 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 H3F3CQ6NXT2 135 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 TMEM64Q6YI46 380 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 LANCL3Q6ZV70 420 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CBLL1Q75N03 491 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 SLC29A4Q7RTT9 530 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 LDB1Q86U70 411 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 RCBTB1Q8NDN9 531 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 OR13C3Q8NGS6 347 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 SPRYD4Q8WW59 207 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ZNF668Q96K58 619 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 MFRPQ9BY79 579 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ARHGAP39Q9C0H5 1083 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 OR2AG1Q9H205 316 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 SOX17Q9H6I2 414 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ATP13A2Q9NQ11 1180 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 TAS2R3Q9NYW6 316 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CHD5Q8TDI0 1954 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 A0A1W2PRQ8 180 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 KIAA0513O60268 411 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 PDGFAP04085 211 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 UBL4AP11441 157 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 CASP3P42574 277 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 MAN2A2P49641 1150 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 PRKXP51817 358 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 UBE2G2P60604 165 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 SIM2Q14190 667 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 MICAQ29983 383 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.99□□□□□ -1.61
SCN1A-201ENST00000303395 KCNRGQ8N5I3 272 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 FBXL8Q96CD0 374 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 TBL1XR1Q9BZK7 514 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 B4GALT7Q9UBV7 327 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 TMEM218A2RU14 115 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 MROH6A6NGR9 719 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ZNF623O75123 536 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 ECI2O75521 394 aa4.99□□□□□ -1.61
SCN1A-201ENST00000303395 WASP42768 502 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms