RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 CIDECQ96AQ7 238 aaPredicted RBP17.51■□□□□ 0.39
PCDH1-201ENST00000287008 SLC7A6OSQ96CW6 309 aaPredicted RBP17.51■□□□□ 0.39
PCDH1-201ENST00000287008 HDAC8Q9BY41 377 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 DPAGT1Q9H3H5 408 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 CDH20Q9HBT6 801 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 MCTS1Q9ULC4 181 aaKnown RBP17.51■□□□□ 0.39
PCDH1-201ENST00000287008 MYH7P12883 1935 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 MMP12P39900 470 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 POU3F4P49335 361 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 CNIH3Q8TBE1 160 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 ELP5Q8TE02 316 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 ATOH1Q92858 354 aaPredicted RBP17.51■□□□□ 0.39
PCDH1-201ENST00000287008 FAM46AQ96IP4 442 aaKnown RBP17.51■□□□□ 0.39
PCDH1-201ENST00000287008 OR5B2Q96R09 309 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 LOC100509620A0A075B734 347 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 H0YGG7 62 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 RASAL1O95294 804 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 HMGA1P17096 107 aaKnown RBP17.51■□□□□ 0.39
PCDH1-201ENST00000287008 THBS2P35442 1172 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 ARF3P61204 181 aaPredicted RBP17.51■□□□□ 0.39
PCDH1-201ENST00000287008 LEG1Q6P5S2 330 aa17.51■□□□□ 0.39
PCDH1-201ENST00000287008 ANKRD28O15084 1053 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 GJB3O75712 270 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 UBL4AP11441 157 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 VEZF1Q14119 521 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 LIPKQ5VXJ0 399 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 ZNF619Q8N2I2 560 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 HOXB13Q92826 284 aaPredicted RBP17.5■□□□□ 0.39
PCDH1-201ENST00000287008 SOX17Q9H6I2 414 aaPredicted RBP17.5■□□□□ 0.39
PCDH1-201ENST00000287008 GAREM1Q9H706 876 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 CUEDC1Q9NWM3 386 aaPredicted RBP17.5■□□□□ 0.39
PCDH1-201ENST00000287008 NME4O00746 187 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 OR1D4P47884 311 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 PRKXP51817 358 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 SPHARQ15513 63 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 DCAF12Q5T6F0 453 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 ZNF367Q7RTV3 350 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 OR8H1Q8NGG4 311 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 KLHL21Q9UJP4 597 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 MYH8P13535 1937 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 COL16A1Q07092 1604 aaPredicted RBP17.5■□□□□ 0.39
PCDH1-201ENST00000287008 GGT3PA6NGU5 568 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 H3BSA7 217 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 SULT2B1O00204 365 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 PHYHO14832 338 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 SCRG1O75711 98 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 IRF2P14316 349 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 FRKP42685 505 aaPredicted RBP17.5■□□□□ 0.39
PCDH1-201ENST00000287008 SLC18B1Q6NT16 456 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 CEACAM19Q7Z692 300 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 INO80EQ8NBZ0 244 aaPredicted RBP17.5■□□□□ 0.39
PCDH1-201ENST00000287008 MED11Q9P086 117 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 SLC35A3Q9Y2D2 325 aa17.5■□□□□ 0.39
PCDH1-201ENST00000287008 M0R3H8 397 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 IGHEP01854 428 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 ETV4P43268 484 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 PRPS1P60891 318 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 HS3ST5Q8IZT8 346 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 MGLLQ99685 303 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 ULBP3Q9BZM4 244 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 SLC6A16Q9GZN6 736 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 PMF1-BGLAPU3KQ54 211 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.49■□□□□ 0.39
PCDH1-201ENST00000287008 DISC1C4P0D8 188 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 HOXC11O43248 304 aaPredicted RBP17.49■□□□□ 0.39
PCDH1-201ENST00000287008 PLATP00750 562 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 RETP07949 1114 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 GRPRP30550 384 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 ADRA1AP35348 466 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 PIN1Q13526 163 aaPredicted RBP17.49■□□□□ 0.39
PCDH1-201ENST00000287008 TMPRSS12Q86WS5 348 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 NT5C3BQ969T7 300 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 PBX4Q9BYU1 374 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 ENAMQ9NRM1 1142 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 PLOD2O00469 737 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 ICAM2P13598 275 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 CDKN2CP42773 168 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 TGFBR3Q03167 851 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 PUDPQ08623 228 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 ZNF829Q3KNS6 432 aaPredicted RBP17.49■□□□□ 0.39
PCDH1-201ENST00000287008 ZNF534Q76KX8 674 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 ARL14Q8N4G2 192 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 WDR20Q8TBZ3 569 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 SPRYD4Q8WW59 207 aaPredicted RBP17.49■□□□□ 0.39
PCDH1-201ENST00000287008 ELSPBP1Q96BH3 223 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 SH2B3Q9UQQ2 575 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 FARSAQ9Y285 508 aaKnown RBP17.49■□□□□ 0.39
PCDH1-201ENST00000287008 BLACEA4D250 179 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 EFCAB7A8K855 629 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 HHLA1C9JL84 531 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 CASC3O15234 703 aaKnown RBP17.49■□□□□ 0.39
PCDH1-201ENST00000287008 CD3GP09693 182 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 VASPP50552 380 aaPredicted RBP17.49■□□□□ 0.39
PCDH1-201ENST00000287008 CEBPGP53567 150 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 KATNBL1Q9H079 304 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 SLAMF7Q9NQ25 335 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 FGF21Q9NSA1 209 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 NOP16Q9Y3C1 178 aaKnown RBP17.49■□□□□ 0.39
PCDH1-201ENST00000287008 PCDHA9Q9Y5H5 950 aa17.49■□□□□ 0.39
PCDH1-201ENST00000287008 TRIM64A6NGJ6 449 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms