RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 TNFRSF17Q02223 184 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 STX4Q12846 297 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 EIF2B5Q13144 721 aaKnown RBP5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 CCINQ13939 588 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 KCNAB1Q14722 419 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 KIR2DS3Q14952 304 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 DGUOKQ16854 277 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 MINDY4Q4G0A6 757 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 LIPKQ5VXJ0 399 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 MRM1Q6IN84 353 aaKnown RBP5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 PRR23CQ6ZRP0 262 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 ABHD13Q7L211 337 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 ANKRD13BQ86YJ7 626 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 TMEM255BQ8WV15 326 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 IPCEF1Q8WWN9 437 aaPredicted RBP5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 MSLNLQ96KJ4 702 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 DACH2Q96NX9 599 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 SLC38A3Q99624 504 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 MGLLQ99685 303 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 PITX2Q99697 317 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 MAP3K3Q99759 626 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 TSSK6Q9BXA6 273 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 NT5DC2Q9H857 520 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 TRNAU1APQ9NX07 287 aaKnown RBP5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 DAPK2Q9UIK4 370 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 GPC6Q9Y625 555 aaPredicted RBP5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 CSNK1G3Q9Y6M4 447 aa5.66□□□□□ -1.5
TNFSF4-201ENST00000281834 PRAMEF26H0Y7S4 382 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 M0R082 166 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 HRKO00198 91 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 FAAHO00519 579 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ZIC2O95409 532 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ADAP00813 363 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 CT62P0C5K7 136 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 PORP16435 677 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 GSTM5P46439 218 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 CSNK1EP49674 416 aaKnown RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 CCR4P51679 360 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 RPS6KA3P51812 740 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 GFERP55789 205 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 FOXL2P58012 376 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 CXCR4P61073 352 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 RPS7P62081 194 aaKnown RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 FZD2Q14332 565 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 MAPK14Q16539 360 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ENTPD8Q5MY95 495 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 OR2G6Q5TZ20 316 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 MFSD12Q6NUT3 480 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 PRICKLE2Q7Z3G6 844 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 LHFPL3Q86UP9 236 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 IGFN1Q86VF2 1251 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 CADM2Q8N3J6 435 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 AMER2Q8N7J2 671 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 OR4N2Q8NGD1 307 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 BBS10Q8TAM1 723 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 TEX47Q8TBZ9 253 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 RASSF5Q8WWW0 418 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 BORCS5Q969J3 196 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 TP53INP1Q96A56 240 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 NECTIN4Q96NY8 510 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 DOK1Q99704 481 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ACTRT3Q9BYD9 372 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 TAS2R7Q9NYW3 318 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 CES1P1Q9UKY3 287 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 SLC7A7Q9UM01 511 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 SCML1Q9UN30 329 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ZNF232Q9UNY5 417 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ERGIC3Q9Y282 383 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 TSC22D4Q9Y3Q8 395 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 HSPE1-MOB4S4R3N1 261 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 TTC28Q96AY4 2481 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 AHCTF1Q8WYP5 2266 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 GXYLT2A0PJZ3 443 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ZNF701M0R085 212 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 MYL12BO14950 172 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 GABARAPO95166 117 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 SLC2A10O95528 541 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 OCM2P0CE71 109 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 OCMP0CE72 109 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 SAGP10523 405 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ZNF10P21506 573 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 SSTR4P31391 388 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 RABIFP47224 123 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 RPL6Q02878 288 aaKnown RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ZNF91Q05481 1191 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 DOC2BQ14184 412 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 GAS6Q14393 721 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ZNF267Q14586 743 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 TRIM16LQ309B1 348 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ZNF829Q3KNS6 432 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 PUS10Q3MIT2 529 aaKnown RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 KLHL12Q53G59 568 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 SYT6Q5T7P8 510 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ZAR1Q86SH2 424 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 PEX5LQ8IYB4 626 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 Q8N9G6 341 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 OR51A7Q8NH64 312 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 ZFPM2Q8WW38 1151 aa5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 MMABQ96EY8 250 aaPredicted RBP5.65□□□□□ -1.5
TNFSF4-201ENST00000281834 RBM18Q96H35 190 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms