RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TEAD1P28347 426 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 GPC1P35052 558 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 TAS2R38P59533 333 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 CSNK1G2P78368 415 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 CDK3Q00526 305 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 PRDX1Q06830 199 aaKnown RBP12.12□□□□□ -0.47
C9orf3-201ENST00000277198 DMPKQ09013 629 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 ASAH1Q13510 395 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 ZNF79Q15937 498 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 EOGTQ5NDL2 527 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 SLC36A4Q6YBV0 504 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 ZNF517Q6ZMY9 492 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-201ENST00000277198 NRARPQ7Z6K4 114 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 TMEM163Q8TC26 289 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 KCTD7Q96MP8 289 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 DPH7Q9BTV6 452 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 RAB11FIP5Q9BXF6 653 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 MIR1-1HGQ9H1L0 117 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 SLC23A2Q9UGH3 650 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 TMEM98Q9Y2Y6 226 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 STON1Q9Y6Q2 735 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 FEZF1A0PJY2 475 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 FAM172BPA6NC97 362 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 LRIT2A6NDA9 550 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 EPHX1P07099 455 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 IL7P13232 177 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 NDUFV2P19404 249 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 FGF9P31371 208 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-201ENST00000277198 IFNA8P32881 189 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 DDOSTP39656 456 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 SSR2P43308 183 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 TSFMP43897 325 aaKnown RBP12.12□□□□□ -0.47
C9orf3-201ENST00000277198 SPEM2Q0P670 501 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 ZNF234Q14588 700 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 SLC9A5Q14940 896 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 MINDY4Q4G0A6 757 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 DDI2Q5TDH0 399 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 LIPKQ5VXJ0 399 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 SLC27A4Q6P1M0 643 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 MMAAQ8IVH4 418 aaKnown RBP12.12□□□□□ -0.47
C9orf3-201ENST00000277198 OR56A1Q8NGH5 318 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 GNPDA2Q8TDQ7 276 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 TRMT61AQ96FX7 289 aaKnown RBP12.12□□□□□ -0.47
C9orf3-201ENST00000277198 SLC38A2Q96QD8 506 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 GABRG3Q99928 467 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 SLC22A4Q9H015 551 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 CALML5Q9NZT1 146 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 C5AR2Q9P296 337 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 TRPC4Q9UBN4 977 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 GSTK1Q9Y2Q3 226 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 PCYT1BQ9Y5K3 369 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-201ENST00000277198 CCDC163A0A0D9SF12 145 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 M0R3H8 397 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 SLC30A4O14863 429 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 CDRT1O95170 752 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 TSPAN19P0C672 248 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 MAN2A2P49641 1150 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 NCBP2P52298 156 aaKnown RBP eCLIP12.11□□□□□ -0.47
C9orf3-201ENST00000277198 GAS1P54826 345 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 FOXD4Q12950 439 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-201ENST00000277198 AGERQ15109 404 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 ZIC1Q15915 447 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 SNAPC1Q16533 368 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 ACSM5Q6NUN0 579 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 CD200R1LQ6Q8B3 271 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 IQCHQ86VS3 1027 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 LAX1Q8IWV1 398 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 PLA2G15Q8NCC3 412 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 OR6T1Q8NGN1 323 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 TEX47Q8TBZ9 253 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 BBS4Q96RK4 519 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 WFDC6Q9BQY6 131 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 DUSP15Q9H1R2 295 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-201ENST00000277198 THAP10Q9P2Z0 257 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-201ENST00000277198 FBXW2Q9UKT8 454 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 LIPT1Q9Y234 373 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 SPAG17Q6Q759 2223 aa12.11□□□□□ -0.47
C9orf3-201ENST00000277198 KCNJ13O60928 360 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 FHP07954 510 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 PTBP1P26599 531 aaKnown RBP eCLIP12.1□□□□□ -0.472e-8■■■■■ 34.6
C9orf3-201ENST00000277198 GABRA5P31644 462 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 ETV5P41161 510 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 P2RY2P41231 377 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 RFX2P48378 723 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 ETV1P50549 477 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 RAB28P51157 221 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 ABATP80404 500 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 TSPAN31Q12999 210 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 CARTPTQ16568 116 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 BAK1Q16611 211 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 RASSF6Q6ZTQ3 369 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 WDR53Q7Z5U6 358 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 DEFB119Q8N690 84 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 SRFBP1Q8NEF9 429 aaKnown RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 TOR1AIP2Q8NFQ8 470 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 OR5D16Q8NGK9 328 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 RFKQ969G6 155 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 SARGQ9BW04 601 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 TEX12Q9BXU0 123 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 TEX101Q9BY14 249 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms