RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 OR6C4Q8NGE1 309 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 ASB15Q8WXK1 588 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 HOXB13Q92826 284 aaPredicted RBP10.86□□□□□ -0.67
USP53-201ENST00000274030 PELOQ9BRX2 385 aaKnown RBP10.86□□□□□ -0.67
USP53-201ENST00000274030 ARL6Q9H0F7 186 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 MAGIXQ9H6Y5 334 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 C2orf42Q9NWW7 574 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 VAPAQ9P0L0 249 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 TRAPPC13A5PLN9 417 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 ANTXRLA6NF34 631 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 GGT3PA6NGU5 568 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 ZNF705EA8MWA4 302 aaPredicted RBP10.86□□□□□ -0.67
USP53-201ENST00000274030 BOLA2-SMG1P6H3BVE0 249 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 BRINP1O60477 761 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 CAPNS1P04632 268 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 TMEM225BP0DP42 221 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 CTSCP53634 463 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 GNMTQ14749 295 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 KDELC1Q6UW63 502 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 HACD2Q6Y1H2 254 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 MAMDC2Q7Z304 686 aaPredicted RBP10.86□□□□□ -0.67
USP53-201ENST00000274030 MRPL10Q7Z7H8 261 aaKnown RBP10.86□□□□□ -0.67
USP53-201ENST00000274030 OR2T4Q8NH00 348 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 TMIGD2Q96BF3 282 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 NAA11Q9BSU3 229 aaPredicted RBP10.86□□□□□ -0.67
USP53-201ENST00000274030 LHPPQ9H008 270 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 PRSS21Q9Y6M0 314 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 RNF215Q9Y6U7 377 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 GPR37L1O60883 481 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 UCHL1P09936 223 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 BMP1P13497 986 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 SLC2A5P22732 501 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 UGT2B10P36537 528 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 PTH2RP49190 550 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 TRAM1Q15629 374 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 SPRED3Q2MJR0 410 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 TP53I3Q53FA7 332 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 TRIM46Q7Z4K8 759 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 LMAN1LQ9HAT1 526 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 PAQR5Q9NXK6 330 aaPredicted RBP10.86□□□□□ -0.67
USP53-201ENST00000274030 RIMS3Q9UJD0 308 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 IFT172Q9UG01 1749 aa10.86□□□□□ -0.67
USP53-201ENST00000274030 AGAP5A6NIR3 686 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 SOBPA7XYQ1 873 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 ZNF43P17038 809 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 RAB3BP20337 219 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 RABIFP47224 123 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 SOX9P48436 509 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 PITPNBP48739 271 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 RTP4Q96DX8 246 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 TMEM68Q96MH6 324 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 SLC29A1Q99808 456 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 APOOQ9BUR5 198 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 POTEKPQ9BYX7 375 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 AK1P00568 194 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 TIMP1P01033 207 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 PVRP15151 417 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 GALNT1Q10472 559 aaPredicted RBP10.85□□□□□ -0.67
USP53-201ENST00000274030 EMC10Q5UCC4 262 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 TCEAL8Q8IYN2 117 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 SPRYD4Q8WW59 207 aaPredicted RBP10.85□□□□□ -0.67
USP53-201ENST00000274030 TCEAL3Q969E4 200 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 MSANTD3Q96H12 275 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 DPCDQ9BVM2 203 aaPredicted RBP10.85□□□□□ -0.67
USP53-201ENST00000274030 SLC39A1Q9NY26 324 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 SUSD2Q9UGT4 822 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 C12orf71A8MTZ7 269 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 POU4F2Q12837 409 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 MALLQ13021 153 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 NKPD1Q17RQ9 610 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 BCL2L15Q5TBC7 163 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 TSPYL5Q86VY4 417 aaPredicted RBP10.85□□□□□ -0.67
USP53-201ENST00000274030 TRMT10AQ8TBZ6 339 aaKnown RBP10.85□□□□□ -0.67
USP53-201ENST00000274030 OR4K3Q96R72 315 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 CACNG6Q9BXT2 260 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 OR51B6Q9H340 312 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 DCDC2BA2VCK2 349 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 C17orf105B2RV13 164 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 ADAP00813 363 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 SDC1P18827 310 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 PSMB5P28074 263 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 RGRP47804 291 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 ART1P52961 327 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 FOXK1P85037 733 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 TLE3Q04726 772 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 PTPRRQ15256 657 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 SLC18B1Q6NT16 456 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 DCDC5Q6ZRR9 648 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 MFSD6LQ8IWD5 586 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 ACVR1CQ8NER5 493 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 ANKK1Q8NFD2 765 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 PGAP3Q96FM1 320 aaPredicted RBP10.85□□□□□ -0.67
USP53-201ENST00000274030 FAM71F1Q96KD3 344 aaPredicted RBP10.85□□□□□ -0.67
USP53-201ENST00000274030 SLC46A2Q9BY10 475 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 SDR39U1Q9NRG7 319 aaPredicted RBP10.85□□□□□ -0.67
USP53-201ENST00000274030 MAGED1Q9Y5V3 778 aaPredicted RBP10.85□□□□□ -0.67
USP53-201ENST00000274030 ARID1BQ8NFD5 2236 aaPredicted RBP10.85□□□□□ -0.67
USP53-201ENST00000274030 TRAV18A0A075B6X5 111 aa10.85□□□□□ -0.67
USP53-201ENST00000274030 A8MVJ9 347 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms