RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 H7BY64 318 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 LEFTY2O00292 366 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 DAP3P51398 398 aaKnown RBP7.59□□□□□ -1.2
LIMD1-201ENST00000273317 DIO3P55073 304 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 PEA15Q15121 130 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 CATSPEREQ5SY80 951 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 MLIPQ5VWP3 458 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 DEFB132Q7Z7B7 95 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 S100A7AQ86SG5 101 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 OR52N2Q8NGI0 321 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 RTP4Q96DX8 246 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 KLHDC7BQ96G42 594 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 FAM46AQ96IP4 442 aaKnown RBP7.59□□□□□ -1.2
LIMD1-201ENST00000273317 PRAP1Q96NZ9 151 aa7.59□□□□□ -1.2
LIMD1-201ENST00000273317 CRYZL1O95825 349 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 OSMP13725 252 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 AKR1C2P52895 323 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 SF3B4Q15427 424 aaKnown RBP eCLIP7.58□□□□□ -1.21e-6■■□□□ 12.8
LIMD1-201ENST00000273317 RCBTB1Q8NDN9 531 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 OR4K1Q8NGD4 311 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 TMEM100Q9NV29 134 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 GPR34Q9UPC5 381 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 OR1A2Q9Y585 309 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 DOCK9Q9BZ29 2069 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 CPED1A4D0V7 1026 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 RNF212BA8MTL3 300 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 C11orf98E9PRG8 122 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 F8W036 122 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 ARVCFO00192 962 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 OR8U9P0C7N5 309 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 AKR1C4P17516 323 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 SLC6A8P48029 635 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 LSSP48449 732 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 DHPSP49366 369 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-201ENST00000273317 VEGFCP49767 419 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 PER3P56645 1201 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 KCTD20Q7Z5Y7 419 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 GPR149Q86SP6 731 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 CLDN19Q8N6F1 224 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 ZNF417Q8TAU3 575 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 FNDC9Q8TBE3 224 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 SH3YL1Q96HL8 342 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-201ENST00000273317 PITX2Q99697 317 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 GPATCH2Q9NW75 528 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 RFPL3O75679 317 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 STATHP02808 62 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 CKMT1AP12532 417 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 PRSS3P35030 304 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 CASP6P55212 293 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 LAPTM4AQ15012 233 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 OR4C11Q6IEV9 310 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 NOXA1Q86UR1 476 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 TRMT10AQ8TBZ6 339 aaKnown RBP7.58□□□□□ -1.2
LIMD1-201ENST00000273317 ERVK13-1Q9NX77 482 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 MYO5AQ9Y4I1 1855 aaKnown RBP7.58□□□□□ -1.2
LIMD1-201ENST00000273317 OR6C6A6NF89 314 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 GLOD5A6NK44 160 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 S1PR4O95977 384 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 CREB5Q02930 508 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 KBTBD6Q86V97 674 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 ZNF611Q8N823 705 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 MAN2C1Q9NTJ4 1040 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 FAM53CQ9NYF3 392 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 GLTPQ9NZD2 209 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 BTNL2Q9UIR0 455 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 CFAP20Q9Y6A4 193 aaKnown RBP7.58□□□□□ -1.2
LIMD1-201ENST00000273317 CABIN1Q9Y6J0 2220 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 LEFTY1O75610 366 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 CLIC3O95833 236 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 MAS1P04201 325 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 SEMG2Q02383 582 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 TAP2Q03519 686 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 UPP1Q16831 310 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 PCGF3Q3KNV8 242 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 TXNRD3NBQ6F5E7 133 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 CPNE8Q86YQ8 564 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 SVBPQ8N300 66 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 PAPD5Q8NDF8 572 aaKnown RBP7.58□□□□□ -1.2
LIMD1-201ENST00000273317 AUTS2Q8WXX7 1259 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 ZNF486Q96H40 463 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-201ENST00000273317 SSX3Q99909 188 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 LHPPQ9H008 270 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 NT5DC2Q9H857 520 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 GMEB2Q9UKD1 530 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 RNASET2O00584 256 aaKnown RBP7.58□□□□□ -1.2
LIMD1-201ENST00000273317 CA12O43570 354 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 SYPP08247 313 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 RNF144AP50876 292 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-201ENST00000273317 EVX2Q03828 476 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 TMPPEQ6ZT21 453 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 KIAA0907Q7Z7F0 614 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-201ENST00000273317 TMEM150AQ86TG1 271 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 ESX1Q8N693 406 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 ABHD11Q8NFV4 315 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 HOXB2P14652 356 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 GGT2P36268 569 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 RGS6P49758 472 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 GRB7Q14451 532 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 AGAP7PQ5VUJ5 663 aa7.58□□□□□ -1.2
LIMD1-201ENST00000273317 AGAP6Q5VW22 663 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms