RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 RAB25P57735 213 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 KCNJ8Q15842 424 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 FLYWCH1Q4VC44 716 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 TMPRSS11AQ6ZMR5 421 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 ZNF438Q7Z4V0 828 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 GRHL3Q8TE85 626 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 ATP13A2Q9NQ11 1180 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 HRO43593 1189 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 TMCC2O75069 709 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 ZIC2O95409 532 aaPredicted RBP15.59■□□□□ 0.09
VPS54-201ENST00000272322 ALPPP05187 535 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 HOXB2P14652 356 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 PPP1CAP62136 330 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 DLX2Q07687 328 aaPredicted RBP15.59■□□□□ 0.09
VPS54-201ENST00000272322 ARHGAP19Q14CB8 494 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 PRRT3Q5FWE3 981 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 GLCCI1Q86VQ1 547 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 OR2L5Q8NG80 312 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 ELP4Q96EB1 424 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 SLC35A4Q96G79 324 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 CDCA4Q9BXL8 241 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 PCBD2Q9H0N5 130 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 SMURF1Q9HCE7 757 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 A0A1W2PPK0 400 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 CD8B2A6NJW9 211 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 GMFGO60234 142 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 LALBAP00709 142 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 CD8BP10966 210 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 AGERQ15109 404 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 DEFB119Q8N690 84 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 OR51G2Q8NGK0 314 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 OR52P1PQ8NH57 321 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 RAB7BQ96AH8 199 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 NELL2Q99435 816 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 OR51V1Q9H2C8 321 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 SLC38A1Q9H2H9 487 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 CFL2Q9Y281 166 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 PEX16Q9Y5Y5 336 aa15.59■□□□□ 0.09
VPS54-201ENST00000272322 A0A1W2PQL4 384 aaPredicted RBP15.58■□□□□ 0.09
VPS54-201ENST00000272322 KLF8O95600 359 aaPredicted RBP15.58■□□□□ 0.09
VPS54-201ENST00000272322 APOA1P02647 267 aa15.58■□□□□ 0.09
VPS54-201ENST00000272322 TP53P04637 393 aaPredicted RBP15.58■□□□□ 0.09
VPS54-201ENST00000272322 GYPBP06028 91 aa15.58■□□□□ 0.09
VPS54-201ENST00000272322 CTSBP07858 339 aa15.58■□□□□ 0.09
VPS54-201ENST00000272322 RPS21P63220 83 aaKnown RBP15.58■□□□□ 0.09
VPS54-201ENST00000272322 PRR5P85299 388 aa15.58■□□□□ 0.09
VPS54-201ENST00000272322 ENTPD8Q5MY95 495 aa15.58■□□□□ 0.09
VPS54-201ENST00000272322 CDC73Q6P1J9 531 aa15.58■□□□□ 0.09
VPS54-201ENST00000272322 FBXO46Q6PJ61 603 aaPredicted RBP15.58■□□□□ 0.09
VPS54-201ENST00000272322 CYB561A3Q8NBI2 242 aa15.58■□□□□ 0.09
VPS54-201ENST00000272322 ENKD1Q9H0I2 346 aa15.58■□□□□ 0.09
VPS54-201ENST00000272322 CLCA3PQ9Y6N3 262 aa15.58■□□□□ 0.09
VPS54-201ENST00000272322 CELSR3Q9NYQ7 3312 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 OR6C74A6NCV1 312 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 SOCS6O14544 535 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 MAGEB4O15481 346 aaPredicted RBP15.58■□□□□ 0.08
VPS54-201ENST00000272322 P2RX6O15547 441 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 DPM1O60762 260 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 CTSVO60911 334 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 REM1O75628 298 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 LGI1O95970 557 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 CRYBB2P43320 205 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 COPZ1P61923 177 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 TIMM50Q3ZCQ8 353 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 MFSD4BQ5TF39 518 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 AKAP14Q86UN6 197 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 LAPTM4BQ86VI4 370 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 ANKK1Q8NFD2 765 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 OR51L1Q8NGJ5 315 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 OR51A7Q8NH64 312 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 SP7Q8TDD2 431 aaPredicted RBP15.58■□□□□ 0.08
VPS54-201ENST00000272322 SAMD8Q96LT4 415 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 DPH1Q9BZG8 443 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 MAT2BQ9NZL9 334 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 SLC7A7Q9UM01 511 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 PEX12O00623 359 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 SCG5P05408 212 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 NT5EP21589 574 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 CMPK1P30085 196 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 TRIM23P36406 574 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 CDH11P55287 796 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 FAM214AQ32MH5 1076 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 SIPA1Q96FS4 1042 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 RSPH9Q9H1X1 276 aaPredicted RBP15.58■□□□□ 0.08
VPS54-201ENST00000272322 TCEAL2Q9H3H9 227 aaPredicted RBP15.58■□□□□ 0.08
VPS54-201ENST00000272322 SLC25A19Q9HC21 320 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 ACSS1Q9NUB1 689 aaPredicted RBP15.58■□□□□ 0.08
VPS54-201ENST00000272322 ENOPH1Q9UHY7 261 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 PCDHGA4Q9Y5G9 962 aa15.58■□□□□ 0.08
VPS54-201ENST00000272322 WDFY4Q6ZS81 3184 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 MPZL2O60487 215 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 CCNKO75909 580 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 C5AR1P21730 350 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 PKLRP30613 574 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 ADPRHP54922 357 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 RNASE12Q5GAN4 147 aaKnown RBP15.57■□□□□ 0.08
VPS54-201ENST00000272322 ZNF776Q68DI1 518 aaPredicted RBP15.57■□□□□ 0.08
VPS54-201ENST00000272322 SLC48A1Q6P1K1 146 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 SLC27A4Q6P1M0 643 aa15.57■□□□□ 0.08
VPS54-201ENST00000272322 NCCRP1Q6ZVX7 275 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms