RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 DEFB123Q8N688 67 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 NR4A3Q92570 626 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 DIO2Q92813 273 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 IER2Q9BTL4 223 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 PRR14Q9BWN1 585 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 SAP130Q9H0E3 1048 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 TRIM45Q9H8W5 580 aaPredicted RBP15.5■□□□□ 0.07
CCDC40-201ENST00000269318 SOHLH2Q9NX45 425 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 TMEM9Q9P0T7 183 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 SLC13A4Q9UKG4 626 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 CLDN16Q9Y5I7 305 aa15.5■□□□□ 0.07
CCDC40-201ENST00000269318 CENPVL1A0A0U1RR11 272 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 BLACEA4D250 179 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 AGAP5A6NIR3 686 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 RGS10O43665 173 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 NUDT21O43809 227 aaKnown RBP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 INMTO95050 263 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 MT-ND2P03891 347 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 TP53P04637 393 aaPredicted RBP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 S1PR1P21453 382 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 ACVR2AP27037 513 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 MASP1P48740 699 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 GP2P55259 537 aaKnown RBP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 LSM11P83369 360 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 MAT1AQ00266 395 aaKnown RBP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 ROR2Q01974 943 aaKnown RBP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 TCTE1Q5JU00 501 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 DCST2Q5T1A1 773 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 CD300LDQ6UXZ3 194 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 MAMSTRQ6ZN01 415 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 PRSS48Q7RTY5 328 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 ZER1Q7Z7L7 766 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 P3H2Q8IVL5 708 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 VWA5B2Q8N398 1253 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 LINC00471Q8N535 108 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 OR4K5Q8NGD3 323 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 PIK3R3Q92569 461 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 PEX11GQ96HA9 241 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 CTPS2Q9NRF8 586 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 FKBP14Q9NWM8 211 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 NDOR1Q9UHB4 597 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 PSORS1C1Q9UIG5 152 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 CSNK1G3Q9Y6M4 447 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 CACNA1IQ9P0X4 2223 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 IGHV1OR21-1A0A087WYE8 117 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 CTNSO60931 367 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 ATE1O95260 518 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 THBS1P07996 1170 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 TRHRP34981 398 aaPredicted RBP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 CTSKP43235 329 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 TMBIM6P55061 237 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 OR1D5P58170 312 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 EEF1A1P68104 462 aaKnown RBP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 BNIP3Q12983 259 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 TARDBPQ13148 414 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 ZNF836Q6ZNA1 936 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 SLC35F3Q8IY50 421 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 PEX5LQ8IYB4 626 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 ZNF595Q8IYB9 648 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 OR6C4Q8NGE1 309 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 ADAMTS18Q8TE60 1221 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 SPRTNQ9H040 489 aaPredicted RBP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 IMPAD1Q9NX62 359 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 KLHL28Q9NXS3 571 aa15.49■□□□□ 0.07
CCDC40-201ENST00000269318 TMEM184BQ9Y519 407 aaPredicted RBP15.49■□□□□ 0.07
CCDC40-201ENST00000269318 PCDH15Q96QU1 1955 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 CLDN24A6NM45 220 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 ZNF99A8MXY4 864 aaPredicted RBP15.48■□□□□ 0.07
CCDC40-201ENST00000269318 H3BMH7 237 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 M0R129 80 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 OR10H2O60403 315 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 STX11O75558 287 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 CYP7B1O75881 506 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 IGFBP1P08833 259 aaPredicted RBP15.48■□□□□ 0.07
CCDC40-201ENST00000269318 MMP11P24347 488 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 CNR2P34972 360 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 MAP2K4P45985 399 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 AVPR1BP47901 424 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 PPM1FP49593 454 aaPredicted RBP15.48■□□□□ 0.07
CCDC40-201ENST00000269318 TAS2R41P59536 307 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 CDC42P60953 191 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 CFHR1Q03591 330 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 SLC13A2Q13183 592 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 SHBQ15464 509 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 MAPK14Q16539 360 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 SYT16Q17RD7 645 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 AP1ARQ63HQ0 302 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 C1orf94Q6P1W5 598 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 AHSA2Q719I0 299 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 ZNF619Q8N2I2 560 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 COX18Q8N8Q8 333 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 OR52R1Q8NGF1 315 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 FKBP10Q96AY3 582 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 POLR2J3Q9H1A7 115 aaKnown RBP15.48■□□□□ 0.07
CCDC40-201ENST00000269318 ENAMQ9NRM1 1142 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 SEMA4GQ9NTN9 838 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 FBXO34Q9NWN3 711 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 KLHL3Q9UH77 587 aa15.48■□□□□ 0.07
CCDC40-201ENST00000269318 MRPS33Q9Y291 106 aaKnown RBP15.48■□□□□ 0.07
CCDC40-201ENST00000269318 LAMA1P25391 3075 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms