RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 PUM1Q14671 1186 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDZRN3-201ENST00000263666 Q6ZNB5 142 aa15.25■□□□□ 0.03
PDZRN3-201ENST00000263666 PHOSPHO2Q8TCD6 241 aa15.25■□□□□ 0.03
PDZRN3-201ENST00000263666 GABARAPL3Q9BY60 117 aa15.25■□□□□ 0.03
PDZRN3-201ENST00000263666 KLHL31Q9H511 634 aa15.25■□□□□ 0.03
PDZRN3-201ENST00000263666 HHATLQ9HCP6 504 aa15.25■□□□□ 0.03
PDZRN3-201ENST00000263666 CCDC59Q9P031 241 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-201ENST00000263666 NDOR1Q9UHB4 597 aa15.25■□□□□ 0.03
PDZRN3-201ENST00000263666 IKZF2Q9UKS7 526 aa15.25■□□□□ 0.03
PDZRN3-201ENST00000263666 A0A0G2JMZ2 1700 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 LRRC37A2A6NM11 1700 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 RIIAD1A6NNX1 92 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 CACNB4O00305 520 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 SOCS6O14544 535 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 PROM1O43490 865 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 MMP12P39900 470 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 SSX1Q16384 188 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 CEACAM19Q7Z692 300 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 PHC2Q8IXK0 858 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 YIPF7Q8N8F6 280 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 OR52I1Q8NGK6 324 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 SPPL3Q8TCT6 385 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 TM4SF18Q96CE8 201 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 OTUB2Q96DC9 234 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 CCDC32Q9BV29 185 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 SRMSQ9H3Y6 488 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 SLAMF7Q9NQ25 335 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 GPATCH2Q9NW75 528 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 CA5BQ9Y2D0 317 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 RLN1P04808 185 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 IL1RNP18510 177 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 POLR2CP19387 275 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 FUT1P19526 365 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 ARTNQ5T4W7 220 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 ZER1Q7Z7L7 766 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 SFTPA1Q8IWL2 248 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 TXNDC15Q96J42 360 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 PITX2Q99697 317 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 GLIPR2Q9H4G4 154 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 FBXL12Q9NXK8 326 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 WSB2Q9NYS7 404 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 KLK4Q9Y5K2 254 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 H3BQ06 376 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 CMPK1P30085 196 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 FRRS1Q6ZNA5 592 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 SNAPC3Q92966 411 aa15.24■□□□□ 0.03
PDZRN3-201ENST00000263666 MAGEB4O15481 346 aaPredicted RBP15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 PAHP00439 452 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 SCG5P05408 212 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 SLC35G6P0C7Q6 338 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 PEPDP12955 493 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 ZNF234Q14588 700 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 DPPA4Q7L190 304 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 SYT9Q86SS6 491 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 METTL27Q8N6F8 245 aaPredicted RBP15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 LGR4Q9BXB1 951 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 ZBP1Q9H171 429 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 ZNF224Q9NZL3 707 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 PCDHGB1Q9Y5G3 927 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 TRPM6Q9BX84 2022 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 TRIM64A6NGJ6 449 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 LCMT2O60294 686 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 CD3GP09693 182 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 SOX2P48431 317 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 ELAVL3Q14576 367 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 ABI3BPQ7Z7G0 1075 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 SUN5Q8TC36 379 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 ZG16BQ96DA0 208 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 GALNT9Q9HCQ5 603 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 TMEM138Q9NPI0 162 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 THSD1Q9NS62 852 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 WDR90Q96KV7 1748 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 LYRM1O43325 122 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 STX11O75558 287 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 AK4P27144 223 aaPredicted RBP15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 MRPL19P49406 292 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 UBXN2BQ14CS0 331 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 FXNQ16595 210 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 NOXA1Q86UR1 476 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 SERPINA12Q8IW75 414 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 VWA5B2Q8N398 1253 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 ACOT4Q8N9L9 421 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 CNOT2Q9NZN8 540 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 ATG4BQ9Y4P1 393 aa15.23■□□□□ 0.03
PDZRN3-201ENST00000263666 A0A075B6Q4 140 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 EDDM13A0A1B0GTR0 161 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 PRRT4C9JH25 899 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 I3L521 148 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 NRG2O14511 850 aaPredicted RBP15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 TYRP1P17643 537 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 GSTM3P21266 225 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 UGT2B10P36537 528 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 SHHQ15465 462 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 SYT14P1Q58G82 188 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 RERGQ96A58 199 aaPredicted RBP15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 ZNF582Q96NG8 517 aaPredicted RBP15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 NANSQ9NR45 359 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 DZANK1Q9NVP4 752 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 SLC7A7Q9UM01 511 aa15.22■□□□□ 0.03
PDZRN3-201ENST00000263666 OTOFQ9HC10 1997 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms