RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ZNF860A6NHJ4 632 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 DNAJB6O75190 326 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 FGBP02675 491 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 CISD3P0C7P0 127 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 CCL5P13501 91 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 NTSP30990 170 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 CTNNB1P35222 781 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 RPS7P62081 194 aaKnown RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 LCTLQ6UWM7 567 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 FAM92BQ6ZTR7 304 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 C16orf62Q7Z3J2 963 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 CPOQ8IVL8 374 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 KLHDC8AQ8IYD2 350 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 FBXL6Q8N531 539 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 FAM26EQ8N5C1 309 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 OR4Q3Q8NH05 313 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 POLDIP3Q9BY77 421 aaKnown RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 SLC6A17Q9H1V8 727 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 TRIM45Q9H8W5 580 aaPredicted RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 CERS4Q9HA82 394 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 KLHL1Q9NR64 748 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 SPHK1Q9NYA1 384 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 PTGFRNQ9P2B2 879 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 TESQ9UGI8 421 aaKnown RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 SERGEFQ9UGK8 458 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 ZFR2Q9UPR6 939 aaKnown RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 TRANK1O15050 2925 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 TRAV6A0A075B6T7 132 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 A0A1W2PRQ8 180 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 LRIT2A6NDA9 550 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 MEN1O00255 615 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 PAHP00439 452 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 GYPBP06028 91 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 SYPP08247 313 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 PEPDP12955 493 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 PCSK2P16519 638 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 CPEP16870 476 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 MNX1P50219 401 aaPredicted RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 TAS2R38P59533 333 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 ELOAQ14241 798 aaKnown RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 GPR68Q15743 365 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 MLF2Q15773 248 aaPredicted RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 WSCD2Q2TBF2 565 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 PLK5Q496M5 336 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 PLBD1Q6P4A8 553 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 RPTNQ6XPR3 784 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 KRT74Q7RTS7 529 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 TIGD4Q8IY51 512 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 VWA5B2Q8N398 1253 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 KCT2Q8NC54 265 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 OR5K2Q8NHB8 316 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 ZCCHC10Q8TBK6 192 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 DACT3Q96B18 629 aaPredicted RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 SAMD8Q96LT4 415 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 ENKD1Q9H0I2 346 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 OR51V1Q9H2C8 321 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 MCUBQ9NWR8 336 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 TRAPPC4Q9Y296 219 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 A0A0G2JMP0 313 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 A0A0X1KG70 313 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 FAM172BPA6NC97 362 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 HMX3A6NHT5 357 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 NOTOA8MTQ0 251 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 A8MVJ9 347 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 CDC42EP2O14613 210 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 GNB5O14775 395 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 LANCL1O43813 399 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 AIFM1O95831 613 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 ACP2P11117 423 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 TBXA2RP21731 343 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 HTR2BP41595 481 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 IL12RB1P42701 662 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 SLC1A3P43003 542 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 SRP9P49458 86 aaKnown RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 PDX1P52945 283 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 RGS8P57771 180 aaPredicted RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 OR10A3P58181 314 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 CDK3Q00526 305 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.56□□□□□ -1.04
MSH4-201ENST00000263187 E2F2Q14209 437 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 SLC9A5Q14940 896 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 OCLNQ16625 522 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 CCDC58Q4VC31 144 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 LCN1P1Q5VSP4 162 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 XKRXQ6PP77 449 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 SLC36A4Q6YBV0 504 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 PLEKHM3Q6ZWE6 761 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 NRSN1Q8IZ57 195 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 ZNF614Q8N883 585 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 ACOT4Q8N9L9 421 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 SLC16A11Q8NCK7 471 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 OR4M2Q8NGB6 313 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 TMEM163Q8TC26 289 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 SETD7Q8WTS6 366 aaKnown RBP8.56□□□□□ -1.04
MSH4-201ENST00000263187 PHF21AQ96BD5 680 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 UPRTQ96BW1 309 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 ZSCAN32Q9NX65 697 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 DEC1Q9P2X7 70 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 DKK3Q9UBP4 350 aa8.56□□□□□ -1.04
MSH4-201ENST00000263187 GSTK1Q9Y2Q3 226 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms