RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 EBPQ15125 230 aaKnown RBP5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 SNCBQ16143 134 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 GXYLT1Q4G148 440 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 FBLN7Q53RD9 439 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 IL27RAQ6UWB1 636 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 TMIGD1Q6UXZ0 262 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 B3GLCTQ6Y288 498 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 ST13P4Q8IZP2 240 aaPredicted RBP5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 CEP19Q96LK0 163 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 SDF2Q99470 211 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 ARHGDIGQ99819 225 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 NUDT9Q9BW91 350 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 PNRC2Q9NPJ4 139 aaKnown RBP5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 DNMT3AQ9Y6K1 912 aaPredicted RBP5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 CCDC182A6NF36 153 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TTC36A6NLP5 189 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 PRAMEF26H0Y7S4 382 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 RNASET2O00584 256 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 BHLHE40O14503 412 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 CLDN9O95484 217 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 CALB2P22676 271 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 YAP1P46937 504 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 POLR2JP52435 117 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 C6orf52Q5T4I8 152 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TRIM48Q8IWZ4 208 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 ENTHD1Q8IYW4 607 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 NKAPQ8N5F7 415 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 CCDC74AQ96AQ1 378 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF414Q96IQ9 312 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 CIB1Q99828 191 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 NMNAT2Q9BZQ4 307 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TGIF2Q9GZN2 237 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 ATP13A2Q9NQ11 1180 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 VPS29Q9UBQ0 182 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 CORO2BQ9UQ03 480 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 CLCA3PQ9Y6N3 262 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 FKBP6O75344 327 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 SDHBP21912 280 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 GUCA1AP43080 201 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 AP1S2P56377 157 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TMEM236Q5W0B7 351 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 KLHL35Q6PF15 583 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 SHISA6Q6ZSJ9 500 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 CCNYL1Q8N7R7 359 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 ZDHHC1Q8WTX9 485 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 HSD17B8Q92506 261 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TAAR6Q96RI8 345 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 PITX2Q99697 317 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 SYT3Q9BQG1 590 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 ZNF556Q9HAH1 456 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 ARL15Q9NXU5 204 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 OR6C2Q9NZP2 312 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 ADAM30Q9UKF2 790 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 CLCA2Q9UQC9 943 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TBC1D3DA0A087WVF3 549 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TBC1D3IA0A087WXS9 549 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TBC1D3EA0A087X179 549 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TBC1D3KA0A087X1G2 549 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TBC1D3FA6NER0 549 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 URADA6NGE7 173 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TBC1D3LB9A6J9 549 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 G3V3Q6 166 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 SYNCRIPO60506 623 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TBC1D3HP0C7X1 549 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 FCGR1AP12314 374 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 KELP23276 732 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 IDUAP35475 653 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 FEN1P39748 380 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 NHLH1Q02575 133 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 HIST3H3Q16695 136 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TBC1D3GQ6DHY5 549 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TBC1D3CQ6IPX1 549 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 DCP2Q8IU60 420 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TBC1D3Q8IZP1 549 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 LGI4Q8N135 537 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 MYO1HQ8N1T3 1032 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 CFAP61Q8NHU2 1237 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 C8orf44Q96CB5 159 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 ILKAPQ9H0C8 392 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 NXF5Q9H1B4 397 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 C8orf33Q9H7E9 229 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 FANCEQ9HB96 536 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 ATAD3AQ9NVI7 634 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 TAS2R5Q9NYW4 299 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 RNF112Q9ULX5 631 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 DYRK1BQ9Y463 629 aa5.15□□□□□ -1.59
TOPBP1-201ENST00000260810 FAM234BA2RU67 622 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ABHD16AO95870 558 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ARAFP10398 606 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ACADMP11310 421 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 POU3F2P20265 443 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 ITGALP20701 1170 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 DRD5P21918 477 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 HMOX2P30519 316 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 GPR1P46091 355 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 AP2B1P63010 937 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 CMPK2Q5EBM0 449 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 FAM46CQ5VWP2 391 aa5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 CAPN13Q6MZZ7 669 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-201ENST00000260810 PRSS42Q7Z5A4 293 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms