RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CCDC126Q96EE4 140 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 C11orf24Q96F05 449 aaPredicted RBP19.13■□□□□ 0.65
NEDD8-201ENST00000250495 BBS4Q96RK4 519 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 TMUB1Q9BVT8 246 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 SFXN3Q9BWM7 321 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 ACBD3Q9H3P7 528 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 FOLH1BQ9HBA9 442 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 GOLGA8RI6L899 631 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 GOSR1O95249 250 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 PYGBP11216 843 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 CHMP24386 653 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 NAA20P61599 178 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 C2orf80Q0P641 193 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 GAB1Q13480 694 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 SPDYAQ5MJ70 313 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 SLC44A2Q8IWA5 706 aaPredicted RBP19.12■□□□□ 0.65
NEDD8-201ENST00000250495 LINC01560Q8TB33 94 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 SFXN2Q96NB2 322 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 EBPLQ9BY08 206 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 MID1IP1Q9NPA3 183 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 PSMC3IPQ9P2W1 217 aaPredicted RBP19.12■□□□□ 0.65
NEDD8-201ENST00000250495 DKKL1Q9UK85 242 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 FBXL2Q9UKC9 423 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 PLEKHA6Q9Y2H5 1048 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 OR10H1Q9Y4A9 318 aa19.12■□□□□ 0.65
NEDD8-201ENST00000250495 CLCA1A8K7I4 914 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 COQ9O75208 318 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 NME6O75414 186 aaPredicted RBP19.11■□□□□ 0.65
NEDD8-201ENST00000250495 SLITRK5O94991 958 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 DDCP20711 480 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 STARP49675 285 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 LHX2P50458 406 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 PPP2R2AP63151 447 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 FOXF2Q12947 444 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 SLC29A2Q14542 456 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 OR5M10Q6IEU7 315 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 NPSR1Q6W5P4 371 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 CAMKMTQ7Z624 323 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 TGIF2LYQ8IUE0 185 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 CCNYL1Q8N7R7 359 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 OR7G2Q8NG99 324 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 INTS12Q96CB8 462 aaKnown RBP19.11■□□□□ 0.65
NEDD8-201ENST00000250495 KCNA7Q96RP8 456 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 RBM24Q9BX46 236 aaKnown RBP19.11■□□□□ 0.65
NEDD8-201ENST00000250495 GSTO2Q9H4Y5 243 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 GRID1Q9ULK0 1009 aa19.11■□□□□ 0.65
NEDD8-201ENST00000250495 WBP11Q9Y2W2 641 aaKnown RBP19.11■□□□□ 0.65
NEDD8-201ENST00000250495 A0A087WV62 115 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 MYO1GB0I1T2 1018 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 H3BQF6 201 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 GRK2P25098 689 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 DPP4P27487 766 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 ZNF763Q0D2J5 394 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 BCL2A1Q16548 175 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 IMPG1Q17R60 797 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 OR4K17Q8NGC6 315 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 RNF138Q8WVD3 245 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 EFHD2Q96C19 240 aaPredicted RBP19.1■□□□□ 0.65
NEDD8-201ENST00000250495 PIGMQ9H3S5 423 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 MIEF1Q9NQG6 463 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 SDHAF3Q9NRP4 125 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 TBK1Q9UHD2 729 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 ZFHX3Q15911 3703 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 MED12LQ86YW9 2145 aa19.1■□□□□ 0.65
NEDD8-201ENST00000250495 PLOD2O00469 737 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 ZIC3O60481 467 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 MYL2P10916 166 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 ZNF708P17019 499 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 CPA2P48052 419 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 NCBP2P52298 156 aaKnown RBP eCLIP19.09■□□□□ 0.65
NEDD8-201ENST00000250495 GAS1P54826 345 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 DIO3P55073 304 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 DSCR4P56555 118 aaPredicted RBP19.09■□□□□ 0.65
NEDD8-201ENST00000250495 CYP27C1Q4G0S4 372 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 CHMP1BQ7LBR1 199 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 LUZP2Q86TE4 346 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 OR4N2Q8NGD1 307 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 CDC26Q8NHZ8 85 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 FAM76AQ8TAV0 307 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 MBD6Q96DN6 1003 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 DACH2Q96NX9 599 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 ALPK1Q96QP1 1244 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 YIPF4Q9BSR8 244 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 G6PC3Q9BUM1 346 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 TAS2R7Q9NYW3 318 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 PPP4R1LQ9P1A2 415 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 CLCF1Q9UBD9 225 aa19.09■□□□□ 0.65
NEDD8-201ENST00000250495 CRCPO75575 148 aa19.08■□□□□ 0.64
NEDD8-201ENST00000250495 JUNP05412 331 aaKnown RBP19.08■□□□□ 0.64
NEDD8-201ENST00000250495 PEPDP12955 493 aa19.08■□□□□ 0.64
NEDD8-201ENST00000250495 FOXA1P55317 472 aa19.08■□□□□ 0.64
NEDD8-201ENST00000250495 CLDN18P56856 261 aa19.08■□□□□ 0.64
NEDD8-201ENST00000250495 PSG6Q00889 435 aa19.08■□□□□ 0.64
NEDD8-201ENST00000250495 ZNF155Q12901 538 aaPredicted RBP19.08■□□□□ 0.64
NEDD8-201ENST00000250495 FAM71E1Q6IPT2 247 aa19.08■□□□□ 0.64
NEDD8-201ENST00000250495 PAMR1Q6UXH9 720 aa19.08■□□□□ 0.64
NEDD8-201ENST00000250495 GRAMD2AQ8IUY3 354 aa19.08■□□□□ 0.64
NEDD8-201ENST00000250495 MRTO4Q9UKD2 239 aaKnown RBP19.08■□□□□ 0.64
NEDD8-201ENST00000250495 C19orf53Q9UNZ5 99 aaPredicted RBP19.08■□□□□ 0.64
NEDD8-201ENST00000250495 RPH3AQ9Y2J0 694 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms